RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 ADAM5Q6NVV9 412 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 FOXL2NBQ6ZUU3 175 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 SYT9Q86SS6 491 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 JAZF1Q86VZ6 243 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 MEX3DQ86XN8 651 aaKnown RBP11.98□□□□□ -0.49
SHMT2-234ENST00000557703 DEPDC4Q8N2C3 294 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 SLC22A24Q8N4F4 322 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 SYT14Q8NB59 555 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PYDC1Q8WXC3 89 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 LRTOMTQ8WZ04 291 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 GTPBP3Q969Y2 492 aaKnown RBP11.98□□□□□ -0.49
SHMT2-234ENST00000557703 NIPSNAP1Q9BPW8 284 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PRRG3Q9BZD7 231 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 NELFAQ9H3P2 528 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 TBC1D23Q9NUY8 699 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 KIF17Q9P2E2 1029 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 KLHL21Q9UJP4 597 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 APCP25054 2843 aa11.98□□□□□ -0.49
SHMT2-234ENST00000557703 HEATR1Q9H583 2144 aaKnown RBP11.98□□□□□ -0.49
SHMT2-234ENST00000557703 PLCE1Q9P212 2302 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 TEX13CA0A0J9YWL9 993 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 IGKV3-15P01624 115 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 CD3EP07766 207 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 ZNF23P17027 643 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 CDH2P19022 906 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 GIPRP48546 466 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 BLVRAP53004 296 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 IST1P53990 364 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 FOXG1P55316 489 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 MYBPC1Q00872 1141 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 LGALS3BPQ08380 585 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 PPP1R8Q12972 351 aaKnown RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 TSC22D1Q15714 1073 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 MESTQ5EB52 335 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 FBXW10Q5XX13 1052 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 KDM4DQ6B0I6 523 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 SLC27A4Q6P1M0 643 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 SEZ6L2Q6UXD5 910 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 C22orf34Q6ZV56 151 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 TMEM179BQ7Z7N9 219 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 IGFN1Q86VF2 1251 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 ZNF837Q96EG3 531 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 ZC3HAV1LQ96H79 300 aaKnown RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 RBM4BQ9BQ04 359 aaKnown RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 TMEM204Q9BSN7 226 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 RBM4Q9BWF3 364 aaKnown RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 TSSK6Q9BXA6 273 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 CLEC4MQ9H2X3 399 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 S100A14Q9HCY8 104 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 C8orf4Q9NR00 106 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 PAPOLBQ9NRJ5 636 aaKnown RBP11.97□□□□□ -0.49
SHMT2-234ENST00000557703 B3GNT2Q9NY97 397 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 REV1Q9UBZ9 1251 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 FKBP7Q9Y680 259 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 NAV2Q8IVL1 2488 aa11.97□□□□□ -0.49
SHMT2-234ENST00000557703 TACC2O95359 2948 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 NBPF19A0A087WUL8 3843 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-234ENST00000557703 H3BN98 237 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 H3BNX3 289 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 KHDRBS3O75525 346 aaKnown RBP11.96□□□□□ -0.49
SHMT2-234ENST00000557703 PPP1R3DO95685 299 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 IGLV1-44P01699 117 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 LSM6P62312 80 aaKnown RBP11.96□□□□□ -0.49
SHMT2-234ENST00000557703 GLO1Q04760 184 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 SNTB1Q13884 538 aaKnown RBP11.96□□□□□ -0.49
SHMT2-234ENST00000557703 SLC36A3Q495N2 470 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 HIKESHIQ53FT3 197 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 C9orf135Q5VTT2 229 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 ZBTB46Q86UZ6 589 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 OR52N5Q8NH56 324 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 PLPPR2Q96GM1 343 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 EGLN3Q9H6Z9 239 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 CMC2Q9NRP2 79 aa11.96□□□□□ -0.49
SHMT2-234ENST00000557703 RIIAD1A6NNX1 92 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 SOCS2O14508 198 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 TP53P04637 393 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-234ENST00000557703 CST2P09228 141 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 B4GALT1P15291 398 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF3P17036 446 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 MSR1P21757 451 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 PAICSP22234 425 aaKnown RBP11.95□□□□□ -0.5
SHMT2-234ENST00000557703 CD40P25942 277 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 LAP3P28838 519 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 GRK5P34947 590 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 CDKN2AP42771 156 aaKnown RBP11.95□□□□□ -0.5
SHMT2-234ENST00000557703 ERFP50548 548 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 CDK5Q00535 292 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 KCNMB1Q16558 191 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 TMEM53Q6P2H8 277 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 SLC16A14Q7RTX9 510 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 AMIGO2Q86SJ2 522 aa11.95□□□□□ -0.5
SHMT2-234ENST00000557703 TMEM200AQ86VY9 491 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms