RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PTDSS1P48651 473 aaKnown RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 ARF1P84077 181 aaKnown RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 SLX4IPQ5VYV7 408 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 SLC25A47Q6Q0C1 308 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 ABHD12BQ7Z5M8 362 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 OR6V1Q8N148 313 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 HCAR1Q9BXC0 346 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 MED20Q9H944 212 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 SRA1Q9HD15 236 aaKnown RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 CIB4A0PJX0 185 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 RIIAD1A6NNX1 92 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 FAM171A2A8MVW0 826 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 C16orf97H3BN30 126 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 CLUP10909 449 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 ZNF133P52736 654 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 SNAPC1Q16533 368 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 OTPQ5XKR4 325 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 BHLHA15Q7RTS1 189 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 OR9Q1Q8NGQ5 310 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 S100PBPQ96BU1 408 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 DOPEY2Q9Y3R5 2298 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 UGT2A1Q9Y4X1 527 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 ICE1Q9Y2F5 2266 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 PRR14LQ5THK1 2151 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 ZNF99A8MXY4 864 aaPredicted RBP13.41□□□□□ -0.26
NEDD1-213ENST00000557644 E9PQ18 207 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 PRKYO43930 277 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 GPANK1O95872 356 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 RENP00797 406 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 HMGN1P05114 100 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 GYPBP06028 91 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 B4GALT1P15291 398 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 HIKESHIQ53FT3 197 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 C10orf128Q5T292 105 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 C12orf73Q69YU5 71 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 ZNRF4Q8WWF5 429 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 UBE2FQ969M7 185 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 OTULINQ96BN8 352 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 ACTR6Q9GZN1 396 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 NELFAQ9H3P2 528 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 KLHL21Q9UJP4 597 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 HCFC1P51610 2035 aa13.41□□□□□ -0.26
NEDD1-213ENST00000557644 A0A1W2PR80 420 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 AHCYL1O43865 530 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 IFNGP01579 166 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 ZNF3P17036 446 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 IL32P24001 234 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 STK11Q15831 433 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 GABRA6Q16445 453 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 OR51L1Q8NGJ5 315 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 OR1K1Q8NGR3 316 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 PTP4A1Q93096 173 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 HRASLS5Q96KN8 279 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 FOXB1Q99853 325 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 C8orf4Q9NR00 106 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 FAM118AQ9NWS6 357 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 PRSS44E7EML9 344 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 TGFBR3Q03167 851 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 PLBD1Q6P4A8 553 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 KLHL24Q6TFL4 600 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 BCDIN3DQ7Z5W3 292 aaKnown RBP13.4□□□□□ -0.26
NEDD1-213ENST00000557644 TCEANCQ8N8B7 351 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 FNDC8Q8TC99 324 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 LRRC46Q96FV0 321 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 SNX18Q96RF0 628 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 IL4I1Q96RQ9 567 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 TEX12Q9BXU0 123 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 HINT3Q9NQE9 182 aaKnown RBP13.4□□□□□ -0.26
NEDD1-213ENST00000557644 B9D1Q9UPM9 204 aa13.4□□□□□ -0.26
NEDD1-213ENST00000557644 COA3Q9Y2R0 106 aaPredicted RBP13.4□□□□□ -0.26
NEDD1-213ENST00000557644 IGLV1-36A0A0B4J1U3 117 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 SCG5P05408 212 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 NR2C1P13056 603 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 PYCR1P32322 319 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 AQP4P55087 323 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF813Q6ZN06 617 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 CPOQ8IVL8 374 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 BBS1Q8NFJ9 593 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 LINC01560Q8TB33 94 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 PLEKHA8Q96JA3 519 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 MUS81Q96NY9 551 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 HDHD5Q9BXW7 423 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 NMNAT2Q9BZQ4 307 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 SEC61A2Q9H9S3 476 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 TMEM38BQ9NVV0 291 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
NEDD1-213ENST00000557644 ANKHD1Q8IWZ3 2542 aaKnown RBP13.39□□□□□ -0.27
NEDD1-213ENST00000557644 LOC100130705A0A1B0GUX0 176 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 TLX2O43763 284 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-213ENST00000557644 MPZL1O95297 269 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 CLIC3O95833 236 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 PCYT1AP49585 367 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF84P51523 738 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 EFNB1P98172 346 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 FAM81AQ8TBF8 368 aa13.39□□□□□ -0.27
NEDD1-213ENST00000557644 BCL2L2Q92843 193 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-213ENST00000557644 RDH12Q96NR8 316 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms