RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NMRAL1Q9HBL8 299 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 NT5MQ9NPB1 228 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 ZDHHC4Q9NPG8 344 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 EXOSC3Q9NQT5 275 aaKnown RBP3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 ASF1BQ9NVP2 202 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 FAM120CQ9NX05 1096 aaKnown RBP3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 BFARQ9NZS9 450 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 PITPNC1Q9UKF7 332 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 SPATA2Q9UM82 520 aa3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 PACSIN2Q9UNF0 486 aaPredicted RBP3.93□□□□□ -1.78
MTHFD1-216ENST00000557539 A0A1B0GUH1 482 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 A0A1W2PPE3 182 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 NVLO15381 856 aaKnown RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 AKR7A2O43488 359 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 PFKFB2O60825 505 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 AMBPP02760 352 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 HCKP08631 526 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 SNRPCP09234 159 aaKnown RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 ZNF26P17031 533 aaPredicted RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 IDSP22304 550 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 STARP49675 285 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 LIM2P55344 173 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 GSCP56915 257 aaPredicted RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 EIF3EP60228 445 aaKnown RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 CSNK1G2P78368 415 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 VLDLRP98155 873 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 IFT88Q13099 833 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 CRMP1Q14194 572 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 FASTKD3Q14CZ7 662 aaKnown RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 ZFP69Q49AA0 526 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 C1orf220Q5T0J3 134 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 ARMCX5Q6P1M9 558 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 CATSPER3Q86XQ3 398 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 RNF130Q86XS8 419 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 BEST4Q8NFU0 473 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 TSEN15Q8WW01 171 aaKnown RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 TAF15Q92804 592 aaKnown RBP eCLIP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 FAF2Q96CS3 445 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 CXorf40BQ96DE9 158 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 IFT74Q96LB3 600 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 PANX2Q96RD6 677 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 SLC35A5Q9BS91 424 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 OCR1Q9BZK8 76 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 ANKRD19PQ9H560 264 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 AUNIPQ9H7T9 357 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 PAK1IP1Q9NWT1 392 aaPredicted RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 PDP1Q9P0J1 537 aaPredicted RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 WRAP73Q9P2S5 460 aaPredicted RBP3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 RNF24Q9Y225 148 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 FANCIQ9NVI1 1328 aa3.92□□□□□ -1.78
MTHFD1-216ENST00000557539 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 KIF2AO00139 706 aaPredicted RBP3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 UGT2B17O75795 530 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 ZFAND5O76080 213 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 H6PDO95479 791 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 P04436 131 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 UMPSP11172 480 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 BCL3P20749 454 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PTBP1P26599 531 aaKnown RBP eCLIP3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 OXTRP30559 389 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 FGF9P31371 208 aaPredicted RBP3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 CD80P33681 288 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 MAP3K8P41279 467 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 DPYSL3Q14195 570 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 CHRNA6Q15825 494 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PSMD5Q16401 504 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 SBK1Q52WX2 424 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PIP5KL1Q5T9C9 394 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 RFWD3Q6PCD5 774 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 FAM199XQ6PEV8 388 aaPredicted RBP3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 REG3GQ6UW15 175 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 BHLHA9Q7RTU4 235 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 OR2L13Q8N349 312 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PDCL2Q8N4E4 241 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 CATSPER1Q8NEC5 780 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 OR4C5Q8NGB2 326 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 FAM76AQ8TAV0 307 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 SLC38A4Q969I6 547 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 ISG20Q96AZ6 181 aaKnown RBP3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 NUS1Q96E22 293 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 TMEM80Q96HE8 168 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 C9orf85Q96MD7 179 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PGLYRP2Q96PD5 576 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 TAAR1Q96RJ0 339 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 CYP2S1Q96SQ9 504 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 C20orf24Q9BUV8 137 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 TM2D1Q9BX74 207 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 RAB34Q9BZG1 259 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PPA2Q9H2U2 334 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PPDPFQ9H3Y8 114 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 NHEJ1Q9H9Q4 299 aaPredicted RBP3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 EHFQ9NZC4 300 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PTTG3PQ9NZH4 202 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PRODH2Q9UF12 536 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 VANGL2Q9ULK5 521 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 STARD10Q9Y365 291 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 PEX16Q9Y5Y5 336 aa3.91□□□□□ -1.78
MTHFD1-216ENST00000557539 IGHV3OR16-12A0A075B7B8 117 aa3.9□□□□□ -1.79
MTHFD1-216ENST00000557539 MEX3AA1L020 520 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms