RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 PAN3Q58A45 887 aaKnown RBP3.47□□□□□ -1.85
PRPF39-212ENST00000557477 PPM1LQ5SGD2 360 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 DCST2Q5T1A1 773 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ANXA8L1Q5VT79 327 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 OR8G2PQ6IF36 304 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 KDM7AQ6ZMT4 941 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 P2RY8Q86VZ1 359 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 MARCH9Q86YJ5 346 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TCAIMQ8N3R3 496 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 DENND6BQ8NEG7 585 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 LHFPL5Q8TAF8 219 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 DNAJC9Q8WXX5 260 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ING5Q8WYH8 240 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TMIGD2Q96BF3 282 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 C19orf60Q96EN9 201 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 C7orf34Q96L11 122 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 SLC29A1Q99808 456 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ALG12Q9BV10 488 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TSSK1BQ9BXA7 367 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 TRIM45Q9H8W5 580 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-212ENST00000557477 GORASP2Q9H8Y8 452 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 PLGRKTQ9HBL7 147 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 NRBP2Q9NSY0 501 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 COX16Q9P0S2 106 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 CD300AQ9UGN4 299 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 NUP50Q9UKX7 468 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 SNX6Q9UNH7 406 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 ERGIC3Q9Y282 383 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 MYO15AQ9UKN7 3530 aa3.47□□□□□ -1.85
PRPF39-212ENST00000557477 NFASCO94856 1347 aa3.46□□□□□ -1.85
PRPF39-212ENST00000557477 MYO7AQ13402 2215 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 PTPRZ1P23471 2315 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 A0A1B0GTQ1 180 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 GSAPA4D1B5 854 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CTAGE15A4D2H0 777 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 HSBP1L1C9JCN9 74 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 NDUFS8O00217 210 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 BCAS1O75363 584 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 PSIP1O75475 530 aaKnown RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SCRG1O75711 98 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 RBBP9O75884 186 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 H2AFZP0C0S5 128 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 FAM228BP0C875 321 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ICAM2P13598 275 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 NQO1P15559 274 aaKnown RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 RPA2P15927 270 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 TBXA2RP21731 343 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CCNE1P24864 410 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 GDF1P27539 372 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SLC11A1P49279 550 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 TAF6P49848 677 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 RAP1GDS1P52306 607 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 PLA2G16P53816 162 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 AIF1P55008 147 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CARD18P57730 90 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ATP6V0D1P61421 351 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 NAA20P61599 178 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 STX3Q13277 289 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ASAH1Q13510 395 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 HTR4Q13639 388 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SELPLGQ14242 412 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 DPYSL2Q16555 572 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF239Q16600 458 aaKnown RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SLC25A30Q5SVS4 291 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 C1orf146Q5VVC0 180 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 DUPD1Q68J44 220 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 PAMR1Q6UXH9 720 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 C2orf66Q6UXQ4 117 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CTAGE6Q86UF2 777 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SERPINA9Q86WD7 417 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 LRRC6Q86X45 466 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 VSTM4Q8IW00 320 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 LIX1Q8N485 282 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CD177Q8N6Q3 437 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ANKFN1Q8N957 763 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 OR56B2PQ8NGI1 322 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CCDC12Q8WUD4 166 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SPRYD4Q8WW59 207 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 TRUB1Q8WWH5 349 aaKnown RBP3.46□□□□□ -1.86
PRPF39-212ENST00000557477 MYLPFQ96A32 169 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 B3GALT6Q96L58 329 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SIGLEC12Q96PQ1 595 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 OR5M11Q96RB7 305 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 DPH7Q9BTV6 452 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 DUSP16Q9BY84 665 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 LHX5Q9H2C1 402 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SLC7A10Q9NS82 523 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 NMRK1Q9NWW6 199 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 GNG12Q9UBI6 72 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ABCD2Q9UBJ2 740 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 Q9UF83 564 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 CYB5R1Q9UHQ9 305 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 ENOPH1Q9UHY7 261 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 OR10H1Q9Y4A9 318 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 UBIAD1Q9Y5Z9 338 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 SPTBN4Q9H254 2564 aa3.46□□□□□ -1.86
PRPF39-212ENST00000557477 NCF1BA6NI72 391 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-212ENST00000557477 ARGFXA6NJG6 315 aa3.45□□□□□ -1.86
PRPF39-212ENST00000557477 NCF1CA8MVU1 366 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-212ENST00000557477 E7EWF7 191 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms