RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 H3BUX3 64 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 AKAP8O43823 692 aaKnown RBP7.68□□□□□ -1.18
NEDD1-211ENST00000557454 TBX19O60806 448 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 CYB5R3P00387 301 aaPredicted RBP7.68□□□□□ -1.18
NEDD1-211ENST00000557454 CCNOP22674 350 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 LIPAP38571 399 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 CRATP43155 626 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 GATA4P43694 442 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 ETF1P62495 437 aaKnown RBP7.68□□□□□ -1.18
NEDD1-211ENST00000557454 ZNF404Q494X3 552 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 MBNL2Q5VZF2 373 aaKnown RBP7.68□□□□□ -1.18
NEDD1-211ENST00000557454 ZNF841Q6ZN19 808 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 COMTD1Q86VU5 262 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 TMEM139Q8IV31 216 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 OR2Z1Q8NG97 314 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 OR5AK3PQ8NH89 298 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 PYROXD1Q8WU10 500 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 TFAP2CQ92754 450 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 SLC25A36Q96CQ1 311 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 OXGR1Q96P68 337 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 TECTBQ96PL2 329 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 BAG1Q99933 345 aaPredicted RBP7.68□□□□□ -1.18
NEDD1-211ENST00000557454 SH3GL3Q99963 347 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 EMC6Q9BV81 110 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 C1QTNF3Q9BXJ4 246 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 C1orf198Q9H425 327 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 B3GAT2Q9NPZ5 323 aa7.68□□□□□ -1.18
NEDD1-211ENST00000557454 CGGBP1Q9UFW8 167 aaPredicted RBP7.68□□□□□ -1.18
NEDD1-211ENST00000557454 A0A1W2PRD5 423 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 A0A1W2PRF3 423 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 A0A1W2PRM7 423 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 MEGF11A6BM72 1044 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 A8MVM7 634 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 FTCDNL1E5RQL4 147 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 TP73O15350 636 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 TIMM8AO60220 97 aaPredicted RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 PAHP00439 452 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 AK1P00568 194 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 LHBP01229 141 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 RBP1P09455 135 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 TFPTP0C1Z6 253 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 TNFSF4P23510 183 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 WNT5AP41221 380 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 ARF6P62330 175 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 KCNJ10P78508 379 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 DGCR2P98153 550 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 PRB3Q04118 309 aaPredicted RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 SMU1Q2TAY7 513 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 MTX3Q5HYI7 312 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 FAM201AQ5SY85 155 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 AP1ARQ63HQ0 302 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 TYW3Q6IPR3 259 aaKnown RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 LHFPL2Q6ZUX7 228 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 C16orf62Q7Z3J2 963 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 MIER2Q8N344 545 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 OR1J2Q8NGS2 313 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 VANGL1Q8TAA9 524 aaPredicted RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 ZNF420Q8TAQ5 688 aaPredicted RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 PNPT1Q8TCS8 783 aaKnown RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 TSSK3Q96PN8 268 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 PRR25Q96S07 402 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 DDOQ99489 341 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 NKX3-1Q99801 234 aaPredicted RBP7.67□□□□□ -1.18
NEDD1-211ENST00000557454 MECRQ9BV79 373 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 NPFFR1Q9GZQ6 430 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 LRMDAQ9H2I8 198 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 ZNF702PQ9H963 129 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 MAB21L2Q9Y586 359 aa7.67□□□□□ -1.18
NEDD1-211ENST00000557454 CHST1O43916 411 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 NPIPB7O75200 414 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 SUPT7LO94864 414 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 SEC31AO94979 1220 aaKnown RBP7.66□□□□□ -1.18
NEDD1-211ENST00000557454 AHSA1O95433 338 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 LIPFP07098 398 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 FAHP16930 419 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 ZNF26P17031 533 aaPredicted RBP7.66□□□□□ -1.18
NEDD1-211ENST00000557454 CHATP28329 748 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 FOXA1P55317 472 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 EPS8Q12929 822 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 UNC50Q53HI1 259 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 TMEM53Q6P2H8 277 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 Q6ZR03 302 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 RFPL4BQ6ZWI9 263 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 VMO1Q7Z5L0 202 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 SNX32Q86XE0 403 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 VRK2Q86Y07 508 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 SLC22A24Q8N4F4 322 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 LINC00482Q8N8I6 264 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 OR6N1Q8NGY5 312 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 LRR1Q96L50 414 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 OR2V2Q96R30 315 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 OR5M11Q96RB7 305 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 DCTN5Q9BTE1 182 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 PTDSS2Q9BVG9 487 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 PCDHAC1Q9H158 963 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 GCM1Q9NP62 436 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.66□□□□□ -1.18
NEDD1-211ENST00000557454 WDR45Q9Y484 360 aa7.66□□□□□ -1.18
NEDD1-211ENST00000557454 UBR4Q5T4S7 5183 aa7.65□□□□□ -1.18
NEDD1-211ENST00000557454 IQCMA0A1B0GVH7 501 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms