RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FBXL14Q8N1E6 418 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 ARIH2OSQ8N7S6 290 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 GPX7Q96SL4 187 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-209ENST00000557342 GRIP2Q9C0E4 1043 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 KCNN2Q9H2S1 579 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 B3GNT2Q9NY97 397 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 LYVE1Q9Y5Y7 322 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 POLQO75417 2590 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 PRRC2AP48634 2157 aaKnown RBP10.87□□□□□ -0.67
SLIRP-209ENST00000557342 TACC2O95359 2948 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 ATP6V1G2-DDX39BF2Z307 99 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 GSC2O15499 205 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 HLA-HP01893 362 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 SDHAP31040 664 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 TTKP33981 857 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 FABP6P51161 128 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 IDH3GP51553 393 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 RAB1AP62820 205 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 NKX6-1P78426 367 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 MRPS34P82930 218 aaKnown RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 PIGFQ07326 219 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 NPRL3Q12980 569 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 FLOT2Q14254 428 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 GK3PQ14409 553 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 PGGHGQ32M88 737 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 OR2T5Q6IEZ7 315 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 TMEM53Q6P2H8 277 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 DTX2Q86UW9 622 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 SKA3Q8IX90 412 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 OR4F15Q8NGB8 312 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 OR2T29Q8NH02 315 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 FANK1Q8TC84 345 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 GTPBP3Q969Y2 492 aaKnown RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 NMD3Q96D46 503 aaKnown RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 TRMT61AQ96FX7 289 aaKnown RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 GSX2Q9BZM3 304 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-209ENST00000557342 YY1AP1Q9H869 796 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 REEP1Q9H902 201 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 NRIP3Q9NQ35 241 aa10.86□□□□□ -0.67
SLIRP-209ENST00000557342 ROS1P08922 2347 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 MYO9AB2RTY4 2548 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 DHRS12A0PJE2 317 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF503-AS2A6NEH8 195 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ERICH4A6NGS2 130 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 VSTM5A8MXK1 200 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 CCNB2O95067 398 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SLC2A10O95528 541 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SOD3P08294 240 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 APEHP13798 732 aaKnown RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF26P17031 533 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SLC6A6P31641 620 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 APOBEC3AP31941 199 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 GSSP48637 474 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 PTH2RP49190 550 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 TSPAN31Q12999 210 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 KRR1Q13601 381 aaKnown RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 RFX4Q33E94 735 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 RPL13AP3Q6NVV1 102 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SLC25A47Q6Q0C1 308 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 PRSS57Q6UWY2 283 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 B3GLCTQ6Y288 498 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ADCK1Q86TW2 530 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ADGRG5Q8IZF4 528 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 MUC15Q8N387 334 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 OR4C15Q8NGM1 316 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 NSMAFQ92636 917 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 PERPQ96FX8 193 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 Q96M85 177 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 GPA33Q99795 319 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 TRAF4Q9BUZ4 470 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 CHID1Q9BWS9 393 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 CADM1Q9BY67 442 aaKnown RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 RNF121Q9H920 327 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SIAEQ9HAT2 523 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 CBLN4Q9NTU7 201 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF701Q9NV72 531 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF224Q9NZL3 707 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 POMPQ9Y244 141 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
SLIRP-209ENST00000557342 SAMHD1Q9Y3Z3 626 aaKnown RBP10.85□□□□□ -0.67
SLIRP-209ENST00000557342 TEX13CA0A0J9YWL9 993 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 PRSS37A4D1T9 235 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 OVOL3O00110 214 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 IMPA2O14732 288 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 TXNDC12O95881 172 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 CST1P01037 141 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 PTHP01270 115 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 CELA3BP08861 270 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 BMP4P12644 408 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF14P17017 642 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-209ENST00000557342 CALCRP30988 508 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 GIPRP48546 466 aa10.84□□□□□ -0.67
SLIRP-209ENST00000557342 ADAM8P78325 824 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms