RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 PAQR9Q6ZVX9 377 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 SMIM5Q71RC9 77 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 CAMKMTQ7Z624 323 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TAC4Q86UU9 113 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 MISPQ8IVT2 679 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 CFAP206Q8IYR0 622 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 UMODL1-AS1Q8N2C9 162 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 SLC43A2Q8N370 569 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 HDDC3Q8N4P3 179 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 ARIH2OSQ8N7S6 290 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 L3MBTL4Q8NA19 623 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 GOT1L1Q8NHS2 421 aaPredicted RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 ARRDC2Q8TBH0 407 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TRMT10AQ8TBZ6 339 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 PHOSPHO2Q8TCD6 241 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 SLC7A13Q8TCU3 470 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 RXFP4Q8TDU9 374 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 ASZ1Q8WWH4 475 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 SORCS1Q8WY21 1168 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 NR4A3Q92570 626 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 EXOSC8Q96B26 276 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TMEM68Q96MH6 324 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 ABHD1Q96SE0 405 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 SCN2AQ99250 2005 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 MTERF1Q99551 399 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 EDEM2Q9BV94 578 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TMED9Q9BVK6 235 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TEX12Q9BXU0 123 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 SEC11CQ9BY50 192 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 ACPTQ9BZG2 426 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TM6SF2Q9BZW4 377 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 NPFFR1Q9GZQ6 430 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 POLR1EQ9GZS1 481 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 MFFQ9GZY8 342 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 XKR8Q9H6D3 395 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TMEM38AQ9H6F2 299 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 MVB12BQ9H7P6 319 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 PLEKHA1Q9HB21 404 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 NOX3Q9HBY0 568 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TMEM138Q9NPI0 162 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 EXOSC3Q9NQT5 275 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TVP23BQ9NYZ1 205 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 TREM2Q9NZC2 230 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF69Q9UC07 566 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 HSF4Q9ULV5 492 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 EXOGQ9Y2C4 368 aaKnown RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 RPH3AQ9Y2J0 694 aaPredicted RBP3.4□□□□□ -1.87
FOXN3-213ENST00000556916 PAPPA2Q9BXP8 1791 aa3.4□□□□□ -1.87
FOXN3-213ENST00000556916 DOCK6Q96HP0 2047 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 KCNE1BA0A087WTH5 132 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 FXYD6-FXYD2A0A087WZ82 144 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 C2orf92A0A1B0GVN3 265 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 LOC390937A0A1W2PQ73 354 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 KANTRA0A1W2PQU2 76 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 C9orf170A2RU37 121 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 SLC9B1P1A6NJY1 282 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 KDM4EB2RXH2 506 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 WASH3PC4AMC7 463 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 NPIPB9F8W1W9 429 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 GABARAPH6UMI1 98 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 TMEM189-UBE2V1I3L0A0 370 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 GPR31O00270 319 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 CLDN5O00501 218 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 SCAMP2O15127 329 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 ARPC1BO15143 372 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF749O43361 778 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 SPRY3O43610 288 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 HCRTO43612 131 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 OR10H3O60404 316 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 NME6O75414 186 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 OR2F2O95006 317 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 POP4O95707 220 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 IFNGP01579 166 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 IGKV3-20P01619 116 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 IGLV3-25P01717 112 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 TRBC1P01850 177 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 URODP06132 367 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 H1F0P07305 194 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 IL3P08700 152 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 HOXC4P09017 264 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 CD3GP09693 182 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 LIMS3P0CW19 117 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 LIMS4P0CW20 117 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 SLC2A1P11166 492 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 PRG2P13727 222 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 HSD3B1P14060 373 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 ZNF7P17097 686 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 RAB4AP20338 218 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 DRD5P21918 477 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 GNLYP22749 145 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 ELAVL4P26378 380 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 LAP3P28838 519 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 AQP1P29972 269 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 CCR7P32248 378 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 FAUP35544 74 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 RPL3P39023 403 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 FEN1P39748 380 aaKnown RBP3.39□□□□□ -1.87
FOXN3-213ENST00000556916 PMELP40967 661 aa3.39□□□□□ -1.87
FOXN3-213ENST00000556916 LHX1P48742 406 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms