RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ZMAT5Q9UDW3 170 aaKnown RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF107Q9UII5 783 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-210ENST00000556718 MMP17Q9ULZ9 603 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 STK38LQ9Y2H1 464 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ARL2BPQ9Y2Y0 163 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 ADGRL2O95490 1459 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 GRIN2BQ13224 1484 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 MAGI2Q86UL8 1455 aa3.21□□□□□ -1.9
PRPF39-210ENST00000556718 TRAPPC8Q9Y2L5 1435 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 DNMT1P26358 1616 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 A0A0G2JRQ6 117 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 TRBV11-1A0A0K0K1C0 115 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 A6NIZ1 184 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 FAM25EA8MYX2 175 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 DLGAP1O14490 977 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 GOSR2O14653 212 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 AIM2O14862 343 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 DNAJB6O75190 326 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 DCTN3O75935 186 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 KRT75O95678 551 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 GATA2P23769 480 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 ATP5C1P36542 298 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 KLK7P49862 253 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 FBXW4P57775 412 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 RAP1BP61224 184 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 BASP1P80723 227 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 XIAPP98170 497 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 DR1Q01658 176 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 PPIDQ08752 370 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 ZCWPW2Q504Y3 356 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 LIN52Q52LA3 116 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 TTMPQ5BVD1 217 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 C1orf185Q5T7R7 199 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 C9orf135Q5VTT2 229 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 KCTD16Q68DU8 428 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 SSX9Q7RTT3 188 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 ZBED8Q8IZ13 594 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 CD177Q8N6Q3 437 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 OR52I1Q8NGK6 324 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 OR2G2Q8NGZ5 317 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 DDI1Q8WTU0 396 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 CHCHD10Q8WYQ3 142 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 MARC2Q969Z3 335 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 FAM122AQ96E09 287 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 B3GALT6Q96L58 329 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 OR8B4Q96RC9 309 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 TGS1Q96RS0 853 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 PELOQ9BRX2 385 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 TMEM59Q9BXS4 323 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 NDEL1Q9GZM8 345 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 RANBP3Q9H6Z4 567 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 SH2D2AQ9NP31 389 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 SAMSN1Q9NSI8 373 aaKnown RBP3.2□□□□□ -1.9
PRPF39-210ENST00000556718 GID8Q9NWU2 228 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 CLEC4EQ9ULY5 219 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 GUCA1BQ9UMX6 200 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 HYOU1Q9Y4L1 999 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 TNRQ92752 1358 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 IQSEC2Q5JU85 1478 aa3.2□□□□□ -1.9
PRPF39-210ENST00000556718 CDK13Q14004 1512 aaKnown RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 KIAA0586Q9BVV6 1533 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 KDM6BO15054 1643 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 TRPM1Q7Z4N2 1603 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 HCFC1P51610 2035 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 IGKV1D-8A0A087WSZ0 117 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 NCF1BA6NI72 391 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 OR2AG2A6NM03 316 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SYCE1LA8MT33 242 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 NCF1CA8MVU1 366 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CENPBD1B2RD01 187 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CCL21O00585 134 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 PPP1R2P9O14990 202 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 AGPAT2O15120 278 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SRSF10O75494 262 aaKnown RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 OR2J3O76001 311 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 IGHV3-48P01763 117 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 TCN1P20061 433 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 GABRR1P24046 479 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 COX7A1P24310 79 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CXCR2P25025 360 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 NDUFA8P51970 172 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 UGT2B15P54855 530 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 NUP107P57740 925 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 TIMM10P62072 90 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 HPCAP84074 193 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 DNAJC3Q13217 504 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ATP6AP1Q15904 470 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 TTC23LQ6PF05 361 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SLC25A48Q6ZT89 311 aaKnown RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 FAM220AQ7Z4H9 259 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF546Q86UE3 836 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 MFSD6LQ8IWD5 586 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 FBXO16Q8IX29 292 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 COMMD1Q8N668 190 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SPERTQ8NA61 448 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 BBS1Q8NFJ9 593 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 PLPPR1Q8TBJ4 325 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF564Q8TBZ8 553 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 NAT14Q8WUY8 206 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 RASSF5Q8WWW0 418 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms