RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SEMA4FO95754 770 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PVRP15151 417 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 STOMP27105 288 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CNR2P34972 360 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PTGFRP43088 359 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FASLGP48023 281 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 KHKP50053 298 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 AGFG1P52594 562 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CRISP1P54107 249 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 NCS1P62166 190 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 YPEL5P62699 121 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 DHODHQ02127 395 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 DEFB134Q4QY38 66 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SLC22A6Q4U2R8 563 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FAM199XQ6PEV8 388 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 NAA40Q86UY6 237 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 RANBP3LQ86VV4 465 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM52Q8NDY8 209 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FAM46DQ8NEK8 389 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 RNASE8Q8TDE3 154 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 GPBAR1Q8TDU6 330 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 GRHL3Q8TE85 626 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 HMGB4Q8WW32 186 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FAM3CQ92520 227 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FGF11Q92914 225 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ERGIC1Q969X5 290 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PRRC1Q96M27 445 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 KLHL15Q96M94 604 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF607Q96SK3 696 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PRR14Q9BWN1 585 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PKIBQ9C010 78 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SHARPINQ9H0F6 387 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CSTL1Q9H114 145 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 MIR1-1HGQ9H1L0 117 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ZMAT3Q9HA38 289 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PURGQ9UJV8 347 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 MRTO4Q9UKD2 239 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 DAPP1Q9UN19 280 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PTRH2Q9Y3E5 179 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CLDN16Q9Y5I7 305 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CENPVL1A0A0U1RR11 272 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ANKRD61A6NGH8 418 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 KDM4EB2RXH2 506 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FCMRO60667 390 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 RAD1O60671 282 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PTHP01270 115 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 H1F0P07305 194 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CTSBP07858 339 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ADORA3P0DMS8 318 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SPP1P10451 314 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 NR2F6P10588 404 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CSNK2A2P19784 350 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PSMB9P28065 219 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 S100GP29377 79 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 BMP8BP34820 402 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CTSKP43235 329 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 PKIAP61925 76 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CSNK2A1P68400 391 aaPredicted RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 HNF4GQ14541 408 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF542PQ5EBM4 170 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 THSD4Q6ZMP0 1018 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 LRRC69Q6ZNQ3 347 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 TTLL10Q6ZVT0 673 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CXXC5Q7LFL8 322 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 P2RY8Q86VZ1 359 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SERPINA12Q8IW75 414 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 TMEFF1Q8IYR6 380 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF687Q8N1G0 1237 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 EIF4E3Q8N5X7 224 aaKnown RBP4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CYB561A3Q8NBI2 242 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SLC16A11Q8NCK7 471 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 CSNK2A3Q8NEV1 391 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 NUP43Q8NFH3 380 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 B3GNT7Q8NFL0 401 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 OR56A1Q8NGH5 318 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ZCCHC10Q8TBK6 192 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SLC37A2Q8TED4 501 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 MRGPRFQ96AM1 343 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SFXN2Q96NB2 322 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SLC25A19Q9HC21 320 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ADAP2Q9NPF8 381 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 EQTNQ9NQ60 294 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 FBXL4Q9UKA2 621 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 SLC5A6Q9Y289 635 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 HIF3AQ9Y2N7 669 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 ASXL3Q9C0F0 2248 aa4.65□□□□□ -1.67
TMEM260-210ENST00000556422 HEATR5AQ86XA9 2040 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FER1L5A0AVI2 2057 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SPAG17Q6Q759 2223 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CPED1A4D0V7 1026 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 C19orf67A6NJJ6 358 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 K7EQM0 130 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FAAHO00519 579 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 EMC8O43402 210 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ITGA10O75578 1167 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 THY1P04216 161 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SPARCP09486 303 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SLC35G6P0C7Q6 338 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OR2T7P0C7T2 308 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OSMP13725 252 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms