RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DHRS9Q9BPW9 319 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 GINS4Q9BRT9 223 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 NXF5Q9H1B4 397 aaKnown RBP6.34□□□□□ -1.39
TDP1-213ENST00000555880 UCK1Q9HA47 277 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 GPR27Q9NS67 375 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 EPHA6Q9UF33 1036 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 NUP50Q9UKX7 468 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 ZNF346Q9UL40 294 aaKnown RBP6.34□□□□□ -1.39
TDP1-213ENST00000555880 GTF2A1LQ9UNN4 478 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 MTCH2Q9Y6C9 303 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 REV3LO60673 3130 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 TRAV8-7A0A075B6U6 113 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 A0A1W2PPC4 97 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 A0A1W2PPL8 197 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 GGT3PA6NGU5 568 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 B8ZZF3 427 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 H7C417 338 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 DCTN6O00399 190 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 PRKNO60260 465 aaPredicted RBP6.33□□□□□ -1.4
TDP1-213ENST00000555880 ICOSLGO75144 302 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 MPC2O95563 127 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 CD2P06729 351 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 AKAIN1P0CW23 69 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 PGCP20142 388 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 NFYAP23511 347 aaPredicted RBP6.33□□□□□ -1.4
TDP1-213ENST00000555880 CCKBRP32239 447 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ARL4DP49703 201 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 MECP2P51608 486 aaKnown RBP6.33□□□□□ -1.4
TDP1-213ENST00000555880 ACTBP60709 375 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ACTG1P63261 375 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 DHODHQ02127 395 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ZNF117Q03924 483 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 SSBP1Q04837 148 aaKnown RBP6.33□□□□□ -1.4
TDP1-213ENST00000555880 OPCMLQ14982 345 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ODF4Q2M2E3 257 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 SLC18B1Q6NT16 456 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 FAAP20Q6NZ36 180 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ANKRD16Q6P6B7 361 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 KCTD18Q6PI47 426 aaPredicted RBP6.33□□□□□ -1.4
TDP1-213ENST00000555880 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 IDO2Q6ZQW0 420 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 KRT77Q7Z794 578 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 PM20D2Q8IYS1 436 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 OTOSQ8NHW6 89 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 PTPMT1Q8WUK0 201 aaPredicted RBP6.33□□□□□ -1.4
TDP1-213ENST00000555880 OMA1Q96E52 524 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ZDHHC12Q96GR4 267 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 C4orf45Q96LM5 186 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 RBP7Q96R05 134 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 OR1F2PQ96R84 312 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 TBL1XR1Q9BZK7 514 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 GSX2Q9BZM3 304 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 ADAM19Q9H013 955 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 SLC17A5Q9NRA2 495 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 UPB1Q9UBR1 384 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 COPS7AQ9UBW8 275 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 MTFP1Q9UDX5 166 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 CACNA1CQ13936 2221 aa6.33□□□□□ -1.4
TDP1-213ENST00000555880 A0A087WV48 116 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 LOC100289279A0A1B0GTE1 492 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 FITM1A5D6W6 292 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 A8MUA0 341 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 C11orf98E9PRG8 122 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 MEN1O00255 615 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 GMFGO60234 142 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 EIF4E2O60573 245 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 CTAG2O75638 210 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR2A4O95047 310 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SPARCP09486 303 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 RRASP10301 218 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PTHLHP12272 177 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 GTF2F2P13984 249 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 GLULP15104 373 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 MST1P26927 711 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 CFPP27918 469 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PRSS3P35030 304 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 LTBRP36941 435 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 GMFBP60983 142 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 RPS15P62841 145 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TOMM20Q15388 145 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ELAVL1Q15717 326 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 SGCBQ16585 318 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 FDX2Q6P4F2 183 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 C3P1Q6ZMU1 363 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TTLL10Q6ZVT0 673 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ZNF679Q8IYX0 411 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PRR22Q8IZ63 422 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PRSS35Q8N3Z0 413 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 BMPERQ8N8U9 685 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 LMX1AQ8TE12 382 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TNFAIP8L1Q8WVP5 186 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ASB13Q8WXK3 278 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 MCHR2Q969V1 340 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 FAM3DQ96BQ1 224 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SLC25A36Q96CQ1 311 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 MSANTD3Q96H12 275 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR2A7Q96R45 310 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR8B4Q96RC9 309 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms