RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 FAM3DQ96BQ1 224 aa1.69□□□□□ -2.14
SCFD1-216ENST00000555550 KCTD14Q9BQ13 255 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-216ENST00000555550 TIMM29Q9BSF4 260 aa1.69□□□□□ -2.14
SCFD1-216ENST00000555550 SLC25A2Q9BXI2 301 aa1.69□□□□□ -2.14
SCFD1-216ENST00000555550 PARP12Q9H0J9 701 aaKnown RBP1.69□□□□□ -2.14
SCFD1-216ENST00000555550 POLE4Q9NR33 117 aa1.69□□□□□ -2.14
SCFD1-216ENST00000555550 MRPS18BQ9Y676 258 aaKnown RBP1.69□□□□□ -2.14
SCFD1-216ENST00000555550 PNPLA6Q8IY17 1366 aa1.69□□□□□ -2.14
SCFD1-216ENST00000555550 IGKV2-24A0A0C4DH68 120 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 ZNF726A6NNF4 738 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 UBXN8O00124 270 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 ARPC3O15145 178 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 CHST1O43916 411 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 TBX19O60806 448 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 RAB3DO95716 219 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 FGF1P05230 155 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 GNAO1P09471 354 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 ZNF806P0C7X5 589 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 UBTFL6P0CB48 400 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-216ENST00000555550 SERPINB5P36952 375 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 FDFT1P37268 417 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 CEACAM6P40199 344 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 DUSP3P51452 185 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-216ENST00000555550 RGNQ15493 299 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 TAF9Q16594 264 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 KCTD21Q4G0X4 260 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 SFT2D3Q587I9 215 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 CEMP1Q6PRD7 247 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-216ENST00000555550 HDDC2Q7Z4H3 204 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 MIR7-3HGQ8N6C7 128 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 LKAAEAR1Q8TD35 194 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 TMEM59Q9BXS4 323 aa1.68□□□□□ -2.14
SCFD1-216ENST00000555550 RPF2Q9H7B2 306 aaKnown RBP1.68□□□□□ -2.14
SCFD1-216ENST00000555550 FBXO6Q9NRD1 293 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-216ENST00000555550 DDX19AQ9NUU7 478 aaKnown RBP1.68□□□□□ -2.14
SCFD1-216ENST00000555550 TNS2Q63HR2 1409 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 SHROOM3Q8TF72 1996 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 SHANK1Q9Y566 2161 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 C17orf51A8MQB3 221 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 GOLGA8SH3BPF8 625 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 RP2O75695 350 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 IGHV2-5P01817 119 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 IGHDP01880 384 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 APCSP02743 223 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 HRH1P35367 487 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 PRRX1P54821 245 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 OGDHQ02218 1023 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 ZNF92Q03936 586 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 ZSCAN26Q16670 478 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 DGUOKQ16854 277 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 NADK2Q4G0N4 442 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 SAXO2Q658L1 398 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 OR4F3Q6IEY1 312 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 GALNT17Q6IS24 598 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 ZFP1Q6P2D0 407 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 DNAJC24Q6P3W2 148 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 NOXO1Q8NFA2 376 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 LINC01560Q8TB33 94 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 P2RX4Q99571 388 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 FAIM2Q9BWQ8 316 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 PPA2Q9H2U2 334 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 FAM49BQ9NUQ9 324 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 SMOXQ9NWM0 555 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 UVRAGQ9P2Y5 699 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 MMACHCQ9Y4U1 282 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 IKBKGQ9Y6K9 419 aa1.67□□□□□ -2.14
SCFD1-216ENST00000555550 SDK2Q58EX2 2172 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 TRAV39A0A0B4J263 110 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 A0A1B0GWJ7 208 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 LGALS9O00182 355 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 OR7A10O76100 309 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 RHOBTB1O94844 696 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 KIR3DL2P43630 455 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 ATP1B3P54709 279 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 ZNF616Q08AN1 781 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 AP1ARQ63HQ0 302 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 ENPP6Q6UWR7 440 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 OR9A2Q8NGT5 310 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 OR8U1Q8NH10 309 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 C15orf40Q8WUR7 153 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 TMEM54Q969K7 222 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 ZNF681Q96N22 645 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 RPRD1AQ96P16 312 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-216ENST00000555550 TEKT3Q9BXF9 490 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 MFFQ9GZY8 342 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 RIBC2Q9H4K1 309 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 UBE2ZQ9H832 354 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-216ENST00000555550 ZNF230Q9UIE0 474 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-216ENST00000555550 SIGLEC9Q9Y336 463 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 ADAMTS13Q76LX8 1427 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 CDHR2Q9BYE9 1310 aa1.66□□□□□ -2.14
SCFD1-216ENST00000555550 CCL21O00585 134 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 FCMRO60667 390 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 EIF3GO75821 320 aaKnown RBP eCLIP1.65□□□□□ -2.15
SCFD1-216ENST00000555550 UTS2O95399 124 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 HLA-DQA1P01909 254 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 DTYMKP23919 212 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 MAS1LP35410 378 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 TGFBR1P36897 503 aa1.65□□□□□ -2.15
SCFD1-216ENST00000555550 CDKN1BP46527 198 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms