RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 KLHL30Q0D2K2 578 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ADIGQ0VDE8 80 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SMARCB1Q12824 385 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 OVGP1Q12889 678 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF154Q13106 437 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 EIF3IQ13347 325 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ATXN7L3Q14CW9 347 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CHI3L2Q15782 390 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CHRNA6Q15825 494 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 KLHL40Q2TBA0 621 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GLYR1Q49A26 553 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM52BQ4KMG9 183 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 DNAJC21Q5F1R6 531 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PIP5KL1Q5T9C9 394 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RIPPLY2Q5TAB7 128 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 NCR3LG1Q68D85 454 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 OR8G2PQ6IF36 304 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SPNS3Q6ZMD2 512 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 C16orf47Q6ZP98 133 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 FAM43BQ6ZT52 329 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SCD5Q86SK9 330 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 NELFCDQ8IXH7 590 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 C9orf40Q8IXQ3 194 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ZBED8Q8IZ13 594 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM86AQ8N2M4 240 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CADM2Q8N3J6 435 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF525Q8N782 197 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CNIH3Q8TBE1 160 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ITLN2Q8WWU7 325 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 IL1F10Q8WWZ1 152 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SYAP1Q96A49 352 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SDSLQ96GA7 329 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM80Q96HE8 168 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 VPS39Q96JC1 886 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CATSPER2Q96P56 530 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SLC30A2Q9BRI3 323 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 DPH7Q9BTV6 452 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TPPP3Q9BW30 176 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TSSK1BQ9BXA7 367 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SLC17A9Q9BYT1 436 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 DEFB126Q9BYW3 111 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RIBC2Q9H4K1 309 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 IKZF5Q9H5V7 419 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CALHM2Q9HA72 323 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PNO1Q9NRX1 252 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 MRPL39Q9NYK5 338 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 LAMP5Q9UJQ1 280 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ERVW-1Q9UQF0 538 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SPACA6W5XKT8 324 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ALPK2Q86TB3 2170 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RYR3Q15413 4870 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PPIAL4CA0A0B4J2A2 164 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 OR6C65A6NJZ3 312 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 E7ENQ6 273 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 NDC80O14777 642 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 STX7O15400 261 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SCRG1O75711 98 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 LYPLA2O95372 231 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TNNC2P02585 160 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 OPN1LWP04000 364 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 IGF1P05019 195 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 KRT8P05787 483 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 UGT2B4P06133 528 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CD55P08174 381 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PLEKP08567 350 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GIG44P09565 113 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PPIAL4GP0DN37 164 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CLUP10909 449 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 EPB41P11171 864 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ADRB3P13945 408 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CD1EP15812 388 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CASP1P29466 404 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 OTX2P32243 289 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ACTR1BP42025 376 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ACTR1AP61163 376 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 YWHAGP61981 247 aaKnown RBP eCLIP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PPP1CAP62136 330 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RPL8P62917 257 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 VLDLRP98155 873 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 DPYSL3Q14195 570 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 IRF4Q15306 451 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ELOCQ15369 112 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 TPD52L1Q16890 204 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 FAM120AOSQ5T036 256 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF658Q5TYW1 1059 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PVRIGQ6DKI7 326 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 UFSP1Q6NVU6 142 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CERS6Q6ZMG9 384 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SHISA6Q6ZSJ9 500 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 FAM92BQ6ZTR7 304 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 DPY19L4Q7Z388 723 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 HORMAD1Q86X24 394 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GRAMD2AQ8IUY3 354 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GPR137CQ8N3F9 429 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 OR9A4Q8NGU2 314 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 NANPQ8TBE9 248 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 M1APQ8TC57 530 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CA5BP1Q8WTZ4 195 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RNF139Q8WU17 664 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms