RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PODNL1Q6PEZ8 512 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 LINGO2Q7L985 606 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 RRM2BQ7LG56 351 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 THAP5Q7Z6K1 395 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 TSPYL5Q86VY4 417 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 C17orf78Q8N4C9 275 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 OR4K5Q8NGD3 323 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 OR9K2Q8NGE7 335 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 DNAJA4Q8WW22 397 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 TMEM45BQ96B21 275 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 DDIT4LQ96D03 193 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 HRASLS5Q96KN8 279 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 APOL4Q9BPW4 351 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 C12orf10Q9HB07 376 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 RHCGQ9UBD6 479 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 SCOCQ9UIL1 159 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 NDRG4Q9ULP0 352 aaKnown RBP9.22□□□□□ -0.93
SHMT2-215ENST00000554656 AMDHD2Q9Y303 409 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 ATP23Q9Y6H3 246 aa9.22□□□□□ -0.93
SHMT2-215ENST00000554656 A0A087WUU8 490 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 A0A0B4J2E0 115 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 A0A1B0GX12 115 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 AQP7P3A6NL99 342 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 CPSF4LA6NMK7 179 aaKnown RBP9.21□□□□□ -0.94
SHMT2-215ENST00000554656 FRS3O43559 492 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 EIF1BO60739 113 aaKnown RBP9.21□□□□□ -0.94
SHMT2-215ENST00000554656 MITFO75030 526 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-215ENST00000554656 LYPD3O95274 346 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 IGF2P01344 180 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 IGHV4-31P0DP07 118 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 OSMP13725 252 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 PRG2P13727 222 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 SLC25A16P16260 332 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF16P17020 682 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-215ENST00000554656 MPGP29372 298 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 GSSP48637 474 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 DSCR9P59020 149 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 TOP3AQ13472 1001 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-215ENST00000554656 BLMHQ13867 455 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 RAB35Q15286 201 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 SEC23BQ15437 767 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 OR7A5Q15622 319 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 CHRFAM7AQ494W8 412 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 KCTD21Q4G0X4 260 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF691Q5VV52 312 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 PGBD2Q6P3X8 592 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 MBOAT2Q6ZWT7 520 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 AQP11Q8NBQ7 271 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 OR9Q2Q8NGE9 314 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 GNPDA2Q8TDQ7 276 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 FBLIM1Q8WUP2 373 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 FAM168AQ92567 244 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 BOD1Q96IK1 185 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 SORCS2Q96PQ0 1159 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 NAA11Q9BSU3 229 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-215ENST00000554656 NELFAQ9H3P2 528 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 RIBC2Q9H4K1 309 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 SEC61A2Q9H9S3 476 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 UPB1Q9UBR1 384 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 MOKQ9UQ07 419 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM5Q9Y2B1 443 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 MYRFQ9Y2G1 1151 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 GMPPBQ9Y5P6 360 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 SVEP1Q4LDE5 3571 aa9.21□□□□□ -0.94
SHMT2-215ENST00000554656 IGHV1-18A0A0C4DH31 117 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 VWC2LB2RUY7 222 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 PHF1O43189 567 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-215ENST00000554656 NPIPB7O75200 414 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 GASTP01350 101 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 GNAO1P09471 354 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 FAM157CP0CG43 387 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 FPR3P25089 353 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 HTR2AP28223 471 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 GGT2P36268 569 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 EFNA4P52798 201 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 CRISP1P54107 249 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 CXCR4P61073 352 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 COPZ1P61923 177 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 MYBPC1Q00872 1141 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 TSPAN31Q12999 210 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 SWI5Q1ZZU3 235 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 RBM48Q5RL73 367 aaKnown RBP9.2□□□□□ -0.94
SHMT2-215ENST00000554656 ULK3Q6PHR2 472 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 TTC33Q6PID6 262 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-215ENST00000554656 LINC00114Q6XXX2 140 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF730Q6ZMV8 503 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 RASSF6Q6ZTQ3 369 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 AAED1Q7RTV5 226 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 ZER1Q7Z7L7 766 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 CLDN22Q8N7P3 220 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 ARIH2OSQ8N7S6 290 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 HDAC2Q92769 488 aaKnown RBP9.2□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF566Q969W8 418 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 NIPSNAP1Q9BPW8 284 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 PRSS27Q9BQR3 290 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF426Q9BUY5 554 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 FKRPQ9H9S5 495 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 PARPBPQ9NWS1 579 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 SELENONQ9NZV5 590 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms