RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 C20orf141Q9NUB4 165 aa11.39□□□□□ -0.59
SHMT2-211ENST00000554310 IGHV1-18A0A0C4DH31 117 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 NPIPB13A6NJU9 1138 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 NPIPB4C9JG80 1138 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 E7EQL1 145 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 G3V2T6 193 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 IGLV1-44P01699 117 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 CRYAAP02489 173 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 FUT1P19526 365 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 ARR3P36575 388 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 DAP3P51398 398 aaKnown RBP11.38□□□□□ -0.59
SHMT2-211ENST00000554310 TUBA1BP68363 451 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 TUBA4AP68366 448 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 ADARB1P78563 741 aaKnown RBP11.38□□□□□ -0.59
SHMT2-211ENST00000554310 APOFQ13790 326 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 GK3PQ14409 553 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 TRAM2Q15035 370 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 KRT80Q6KB66 452 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 TBPL2Q6SJ96 375 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 TUBA1AQ71U36 451 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
SHMT2-211ENST00000554310 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 ZDHHC21Q8IVQ6 265 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 MUC15Q8N387 334 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
SHMT2-211ENST00000554310 TMEM54Q969K7 222 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 SLC25A44Q96H78 314 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-211ENST00000554310 Q96MF0 132 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 OSBPL10Q9BXB5 764 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 ANKRD19PQ9H560 264 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 IL1RAPQ9NPH3 570 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 MAN2C1Q9NTJ4 1040 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 CBLN4Q9NTU7 201 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 POFUT2Q9Y2G5 429 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 PCDHGB5Q9Y5G0 923 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
SHMT2-211ENST00000554310 NAV3Q8IVL0 2385 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 A0A1W2PRG6 482 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 MCIDASD6RGH6 385 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 BLOC1S5-TXNDC5H3BN57 136 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 GNGT2O14610 69 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 FFAR1O14842 300 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 PIP5K1CO60331 668 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 SEC14L2O76054 403 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 BCL10O95999 233 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 CD8AP01732 235 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 IGHG1P01857 330 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 ALPLP05186 524 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 TSPAN19P0C672 248 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 CECR9P0C854 216 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 PGA4P0DJD7 388 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 PGA3P0DJD8 388 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 IFI30P13284 250 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 B4GALT1P15291 398 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 CBR1P16152 277 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 CDKN1AP38936 164 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 YAP1P46937 504 aaKnown RBP11.37□□□□□ -0.59
SHMT2-211ENST00000554310 CAPZA2P47755 286 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 RIPPLY3P57055 190 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 PPP2R2BQ00005 443 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 NAAAQ02083 359 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 MELKQ14680 651 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 C11orf71Q6IPW1 123 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 ZNF813Q6ZN06 617 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 USP51Q70EK9 711 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 BIVMQ86UB2 503 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 HIPK1Q86Z02 1210 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 NRMQ8IXM6 262 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 NOXO1Q8NFA2 376 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 ACOT11Q8WXI4 607 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-211ENST00000554310 BPIFA2Q96DR5 249 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 COX4I2Q96KJ9 171 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 FOXB1Q99853 325 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 RBM4BQ9BQ04 359 aaKnown RBP11.37□□□□□ -0.59
SHMT2-211ENST00000554310 RBM4Q9BWF3 364 aaKnown RBP11.37□□□□□ -0.59
SHMT2-211ENST00000554310 GABARAPL1Q9H0R8 117 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-211ENST00000554310 INIPQ9NRY2 104 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 GLTPQ9NZD2 209 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 MOKQ9UQ07 419 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 MYRFQ9Y2G1 1151 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 HIF3AQ9Y2N7 669 aa11.37□□□□□ -0.59
SHMT2-211ENST00000554310 J3KTA2 159 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 F13BP05160 661 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 FABP3P05413 133 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 INHBBP09529 407 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 BMP4P12644 408 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 AQP2P41181 271 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 FABP6P51161 128 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 GSG1Q2KHT4 349 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 KCTD21Q4G0X4 260 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 OR2T5Q6IEZ7 315 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 SHQ1Q6PI26 577 aaKnown RBP11.36□□□□□ -0.59
SHMT2-211ENST00000554310 RNF113BQ8IZP6 322 aaKnown RBP11.36□□□□□ -0.59
SHMT2-211ENST00000554310 OR2T29Q8NH02 315 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms