RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MUC13Q9H3R2 512 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 C1orf198Q9H425 327 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CHODLQ9H9P2 273 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 TMEM38BQ9NVV0 291 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 STX18Q9P2W9 335 aaKnown RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 REV1Q9UBZ9 1251 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 BAG5Q9UL15 447 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SLC7A7Q9UM01 511 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 DYSFO75923 2080 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CUBNO60494 3623 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 A0A1W2PRG6 482 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ELOVL7A1L3X0 281 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 C11orf98E9PRG8 122 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 DHHO43323 396 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 RNF13O43567 381 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 GMNNO75496 209 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 SERPINI2O75830 405 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 OR5F1O95221 314 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 SNAP29O95721 258 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 BCL10O95999 233 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 PTHP01270 115 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 IGHG1P01857 330 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 MT-ND1P03886 318 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ADRA2AP08913 450 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 NR2C1P13056 603 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 HSD17B1P14061 328 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 HOXB6P17509 224 aaKnown RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 PCMT1P22061 227 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ACHEP22303 614 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 DVL1P1P54792 670 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 CDH15P55291 814 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 PSME3P61289 254 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 PIGFQ07326 219 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 CARTPTQ16568 116 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 MSMPQ1L6U9 139 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 SLC36A2Q495M3 483 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 DNAL1Q4LDG9 190 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 NANOGNBQ7Z5D8 188 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 TSPYL5Q86VY4 417 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 RBM45Q8IUH3 476 aaKnown RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF584Q8IVC4 421 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 SLC15A3Q8IY34 581 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ARIH2OSQ8N7S6 290 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 OR2T12Q8NG77 320 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 OR1J2Q8NGS2 313 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 VANGL1Q8TAA9 524 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF583Q96ND8 569 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 PRSS27Q9BQR3 290 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 MRPL13Q9BYD1 178 aaKnown RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 MMADHCQ9H3L0 296 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 SMURF2Q9HAU4 748 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 MEPEQ9NQ76 525 aaPredicted RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ARL8BQ9NVJ2 186 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 GPR160Q9UJ42 338 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF346Q9UL40 294 aaKnown RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 PRPF19Q9UMS4 504 aaKnown RBP5.68□□□□□ -1.5
SLIRP-203ENST00000554074 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
SLIRP-203ENST00000554074 IGLV3-9A0A075B6K5 115 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 SH3PXD2BA1X283 911 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 LRP5LA4QPB2 252 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 B2RBV5 119 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 B4DSR2 109 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 OR7A10O76100 309 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 TFP02787 698 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 QDPRP09417 244 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 UMPSP11172 480 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF250P15622 560 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
SLIRP-203ENST00000554074 RAD52P43351 418 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 DAP3P51398 398 aaKnown RBP5.67□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF84P51523 738 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 SLC7A2P52569 658 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 UGT2B15P54855 530 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 TMEM33P57088 247 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 CLRN1P58418 232 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 TAS2R41P59536 307 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 SELENOVP59797 346 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 MRPS34P82930 218 aaKnown RBP5.67□□□□□ -1.5
SLIRP-203ENST00000554074 MXRA7P84157 204 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 LIPEQ05469 1076 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 RPL18Q07020 188 aaKnown RBP5.67□□□□□ -1.5
SLIRP-203ENST00000554074 BNIP1Q12981 228 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 MELKQ14680 651 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 RAB39AQ14964 217 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 TAF11Q15544 211 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 CR1LQ2VPA4 569 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 PCGF3Q3KNV8 242 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 KRTAP24-1Q3LI83 254 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 MTX3Q5HYI7 312 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 RABL3Q5HYI8 236 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 ELFN2Q5R3F8 820 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 C10orf128Q5T292 105 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 ARMC4Q5T2S8 1044 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 RGS7BPQ6MZT1 257 aaPredicted RBP5.67□□□□□ -1.5
SLIRP-203ENST00000554074 TMEM53Q6P2H8 277 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 CARM1Q86X55 608 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 C1orf174Q8IYL3 243 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 MICU2Q8IYU8 434 aa5.67□□□□□ -1.5
SLIRP-203ENST00000554074 ZCCHC24Q8N2G6 241 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms