RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 MCHR2Q969V1 340 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 NMD3Q96D46 503 aaKnown RBP12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ALKBH3Q96Q83 286 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-210ENST00000553950 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
SHMT2-210ENST00000553950 MNTQ99583 582 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 NUAK2Q9H093 628 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ZNF629Q9UEG4 869 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-210ENST00000553950 MYRFQ9Y2G1 1151 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 MEMO1Q9Y316 297 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 SPENQ96T58 3664 aaKnown RBP12.83□□□□□ -0.36
SHMT2-210ENST00000553950 ALPK2Q86TB3 2170 aa12.83□□□□□ -0.36
SHMT2-210ENST00000553950 IGLV1-36A0A0B4J1U3 117 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 DHHO43323 396 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 MRPS14O60783 128 aaKnown RBP12.82□□□□□ -0.36
SHMT2-210ENST00000553950 HRGP04196 525 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 DBTP11182 482 aaKnown RBP12.82□□□□□ -0.36
SHMT2-210ENST00000553950 CTLA4P16410 223 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 NPR2P20594 1047 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 KIR2DL2P43627 348 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-210ENST00000553950 TGFBR3Q03167 851 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 TLE1Q04724 770 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 KCTD21Q4G0X4 260 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 FBXW9Q5XUX1 488 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 SLC25A47Q6Q0C1 308 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 NUFIP2Q7Z417 695 aaKnown RBP12.82□□□□□ -0.36
SHMT2-210ENST00000553950 OR6V1Q8N148 313 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 UBE2J2Q8N2K1 259 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 OR10H5Q8NGA6 315 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 MRPL48Q96GC5 212 aaKnown RBP12.82□□□□□ -0.36
SHMT2-210ENST00000553950 DMRTA2Q96SC8 542 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 RERGLQ9H628 205 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 SH3BGRL2Q9UJC5 107 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 B9D1Q9UPM9 204 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 OSGIN2Q9Y236 505 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
SHMT2-210ENST00000553950 FREM1Q5H8C1 2179 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 CCDC182A6NF36 153 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 MSTNO14793 375 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 TNFSF13O75888 250 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 FARS2O95363 451 aaKnown RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 FADS2O95864 444 aaKnown RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 HLA-DQA2P01906 255 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 LAP3P28838 519 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 MPGP29372 298 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 GSTT1P30711 240 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 ATP6V1E1P36543 226 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 FMODQ06828 376 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 PMPCAQ10713 525 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 C1QTNF12Q5T7M4 302 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 TSPO2Q5TGU0 170 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 PLXDC2Q6UX71 529 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 C3P1Q6ZMU1 363 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 Q6ZT83 130 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 BEND4Q6ZU67 534 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 FOXL2NBQ6ZUU3 175 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 ZNF540Q8NDQ6 660 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 BBS1Q8NFJ9 593 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 PTP4A1Q93096 173 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 UBE2FQ969M7 185 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 ZNF775Q96BV0 537 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 INTS14Q96SY0 518 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 TEAD3Q99594 435 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 WACQ9BTA9 647 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 HCAR1Q9BXC0 346 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 NELFAQ9H3P2 528 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 MED20Q9H944 212 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 CRLF2Q9HC73 371 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 GPR35Q9HC97 309 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 SRA1Q9HD15 236 aaKnown RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 PLSCR4Q9NRQ2 329 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 INPP5EQ9NRR6 644 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 SLC7A10Q9NS82 523 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 MRPS18AQ9NVS2 196 aaKnown RBP12.81□□□□□ -0.36
SHMT2-210ENST00000553950 COQ3Q9NZJ6 369 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 TMEM14AQ9Y6G1 99 aa12.81□□□□□ -0.36
SHMT2-210ENST00000553950 A0A1W2PPL8 197 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 CCL21O00585 134 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 PHYHO14832 338 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 TMCC2O75069 709 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 UPK3AO75631 287 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 TOXO94900 526 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 GYPBP06028 91 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 CLUP10909 449 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 ZNF823P16415 610 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 MSR1P21757 451 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 CRHBPP24387 322 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 PYCR1P32322 319 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 NUDT6P53370 316 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
SHMT2-210ENST00000553950 HSF2Q03933 536 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 UGT2A3Q6UWM9 527 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 SHFQ7M4L6 423 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
SHMT2-210ENST00000553950 MRGPRGQ86SM5 289 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms