RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ADORA2BP29275 332 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GCKP35557 465 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RFC3P40938 356 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 NBL1P41271 181 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CRATP43155 626 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RPL29P47914 159 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 CSNK1A1P48729 337 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CLDN18P56856 261 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GPX6P59796 221 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 UBE2G2P60604 165 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RPS14P62263 151 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 FKBP3Q00688 224 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 PIGHQ14442 188 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 VAMP3Q15836 100 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 DGUOKQ16854 277 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 C18orf21Q32NC0 220 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 MARCH8Q5T0T0 291 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RNLSQ5VYX0 342 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 PTRHD1Q6GMV3 140 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 ARMCX5Q6P1M9 558 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 TRIM40Q6P9F5 258 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 SPESP1Q6UW49 350 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 FRRS1Q6ZNA5 592 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 SETD3Q86TU7 594 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 ZNF546Q86UE3 836 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CATSPER3Q86XQ3 398 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 PUSL1Q8N0Z8 303 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 PDIK1LQ8N165 341 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 FTMTQ8N4E7 242 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 KIF2BQ8N4N8 673 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 POM121L12Q8N7R1 296 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 PRELID2Q8N945 189 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 DNAAF3Q8N9W5 541 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 AQP11Q8NBQ7 271 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 OR7G1Q8NGA0 311 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 OR5K2Q8NHB8 316 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 C11orf45Q8TAV5 145 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 NUBPLQ8TB37 319 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GTF2H4Q92759 462 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CDKL2Q92772 493 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 EEF1AKMT3Q96AZ1 226 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 MED8Q96G25 268 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 ZBED3Q96IU2 234 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 C9orf85Q96MD7 179 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RARRES2Q99969 163 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 ZNF670Q9BS34 389 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 COPS4Q9BT78 406 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 CCDC94Q9BW85 323 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 OSBPL10Q9BXB5 764 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 HCAR1Q9BXC0 346 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 ULBP2Q9BZM5 246 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 NSRP1Q9H0G5 558 aaKnown RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 RACGAP1Q9H0H5 632 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 PRSS16Q9NQE7 514 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GIN1Q9NXP7 522 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 EURLQ9NYK6 297 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 EHFQ9NZC4 300 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 WRAP73Q9P2S5 460 aaPredicted RBP1.78□□□□□ -2.12
SRP54-204ENST00000553923 SLC17A7Q9P2U7 560 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 DCDC2Q9UHG0 476 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 KIF25Q9UIL4 384 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 RIMS3Q9UJD0 308 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 ING4Q9UNL4 249 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 GOLT1BQ9Y3E0 138 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 URGCP-MRPS24S4R325 110 aa1.78□□□□□ -2.12
SRP54-204ENST00000553923 BRD4O60885 1362 aaPredicted RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 IGLV3-22A0A075B6J6 115 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 GLYATL1P3A0A0U1RQE8 302 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 LOC100131303A0A0U1RQF7 123 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 A0A1B0GTH9 108 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 A0A1W2PQ72 361 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 A0A1W2PRF3 423 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 A0A1W2PRM7 423 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TSPAN11A1L157 253 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PSMB11A5LHX3 300 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TVP23AA6NH52 213 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 USP27XA6NNY8 438 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 MPTX1A8MV57 137 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 LOC110117498-PIK3R3F6TDL0 507 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 F6UB75 175 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 H7C0C1 242 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 DCTN6O00399 190 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PHOX2AO14813 284 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SNAI2O43623 268 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 GMDSO60547 372 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 CBR3O75828 277 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TNFAIP8O95379 198 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PLEKHA8P1O95397 391 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 TDP2O95551 362 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 IGHV3-9P01782 118 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 HBE1P02100 147 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 RHOCP08134 193 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 SNRPCP09234 159 aaKnown RBP1.77□□□□□ -2.13
SRP54-204ENST00000553923 PET100P0DJ07 73 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ZNF250P15622 560 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PGAM1P18669 254 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 OR1E1P30953 314 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 FOXN2P32314 431 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 PCK1P35558 622 aa1.77□□□□□ -2.13
SRP54-204ENST00000553923 ARR3P36575 388 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms