RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ZNF84P51523 738 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 NRN1LQ496H8 165 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 DHFR2Q86XF0 187 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 FGFBP3Q8TAT2 258 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 MS4A3Q96HJ5 214 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 RSRC1Q96IZ7 334 aaKnown RBP17.67■□□□□ 0.42
FOXA1-203ENST00000553751 CLPTM1LQ96KA5 538 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 GPA33Q99795 319 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 SH3GL3Q99963 347 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 ALG12Q9BV10 488 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 DENND2DQ9H6A0 471 aaPredicted RBP17.67■□□□□ 0.42
FOXA1-203ENST00000553751 KRCC1Q9NPI7 259 aaPredicted RBP17.67■□□□□ 0.42
FOXA1-203ENST00000553751 ADAM18Q9Y3Q7 739 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 UGT2A1Q9Y4X1 527 aa17.67■□□□□ 0.42
FOXA1-203ENST00000553751 ENTPD5O75356 428 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 PATE4P0C8F1 98 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 NR2C1P13056 603 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 APOBEC3AP31941 199 aaPredicted RBP17.66■□□□□ 0.42
FOXA1-203ENST00000553751 RPL4P36578 427 aaKnown RBP17.66■□□□□ 0.42
FOXA1-203ENST00000553751 FXYD6P3P58550 94 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 RAB1AP62820 205 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 ERVK-25P63136 954 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 HGFACQ04756 655 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 CD47Q08722 323 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 NUP37Q8NFH4 326 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 CCDC124Q96CT7 223 aaKnown RBP17.66■□□□□ 0.42
FOXA1-203ENST00000553751 ASB9Q96DX5 294 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 TRMT61AQ96FX7 289 aaKnown RBP17.66■□□□□ 0.42
FOXA1-203ENST00000553751 Q96MF0 132 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 CA10Q9NS85 328 aa17.66■□□□□ 0.42
FOXA1-203ENST00000553751 UNC119BA6NIH7 251 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 A6NIZ1 184 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 NDUFB2O95178 105 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 FARS2O95363 451 aaKnown RBP17.65■□□□□ 0.42
FOXA1-203ENST00000553751 RAB36O95755 333 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 IGHV4-39P01824 125 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 CD14P08571 375 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 RAP1BP61224 184 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 RAP1AP62834 184 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 MRPS34P82930 218 aaKnown RBP17.65■□□□□ 0.42
FOXA1-203ENST00000553751 SLC25A47Q6Q0C1 308 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 THSD4Q6ZMP0 1018 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 FAM122BQ7Z309 247 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 ZER1Q7Z7L7 766 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 ARIH2OSQ8N7S6 290 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 OR4F15Q8NGB8 312 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 NABP1Q96AH0 204 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 GPX7Q96SL4 187 aaPredicted RBP17.65■□□□□ 0.42
FOXA1-203ENST00000553751 CACNG6Q9BXT2 260 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 NDEL1Q9GZM8 345 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 MAGIXQ9H6Y5 334 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 AURKCQ9UQB9 309 aa17.65■□□□□ 0.42
FOXA1-203ENST00000553751 NDUFS7O75251 213 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 CDAP32320 146 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 MESTQ5EB52 335 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 THEM4Q5T1C6 240 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 ZNF584Q8IVC4 421 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 IL17RDQ8NFM7 739 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 FNDC8Q8TC99 324 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 NSMAFQ92636 917 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 Q96M85 177 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 THTPAQ9BU02 230 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 NRIP3Q9NQ35 241 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 GRHPRQ9UBQ7 328 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 GDF2Q9UK05 429 aaPredicted RBP17.64■□□□□ 0.41
FOXA1-203ENST00000553751 FBXL3Q9UKT7 428 aa17.64■□□□□ 0.41
FOXA1-203ENST00000553751 TRIM64A6NGJ6 449 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 TRIM64BA6NI03 449 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 H7C1C5 153 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 ACOT8O14734 319 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 OR10H3O60404 316 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 ZNF35P13682 527 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 FOSL1P15407 271 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 FPR3P25089 353 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 LCN6P62502 163 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 RAB39AQ14964 217 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 ADIPOQQ15848 244 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 SWI5Q1ZZU3 235 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 MST1LQ2TV78 715 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 SLC16A14Q7RTX9 510 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 DPPA2Q7Z7J5 298 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 SLC7A6OSQ96CW6 309 aaPredicted RBP17.63■□□□□ 0.41
FOXA1-203ENST00000553751 ZNF570Q96NI8 536 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 RBP7Q96R05 134 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 SIAEQ9HAT2 523 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 IL20RAQ9UHF4 553 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 LYVE1Q9Y5Y7 322 aa17.63■□□□□ 0.41
FOXA1-203ENST00000553751 TEX13CA0A0J9YWL9 993 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 H7C417 338 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 KRT36O76013 467 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 MMP7P09237 267 aaPredicted RBP17.62■□□□□ 0.41
FOXA1-203ENST00000553751 NPR2P20594 1047 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 HMGA2P52926 109 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 ETFDHQ16134 617 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 SLC36A2Q495M3 483 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 DNAL1Q4LDG9 190 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 VHLLQ6RSH7 139 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 SMARCD3Q6STE5 483 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 FOXL2NBQ6ZUU3 175 aa17.62■□□□□ 0.41
FOXA1-203ENST00000553751 LRRC18Q8N456 261 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms