RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MYO10Q9HD67 2058 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 MYO15AQ9UKN7 3530 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 EPG5Q9HCE0 2579 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PTPRSQ13332 1948 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 BAHCC1Q9P281 2608 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF292O60281 2723 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CHD6Q8TD26 2715 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SAGE2PA6NJ88 616 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF716A6NP11 495 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 LOC730098B7Z3J9 87 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 KRTAP4-16G5E9R7 235 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CASQ2O14958 399 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 RS1O15537 224 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 RNF13O43567 381 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SNAI2O43623 268 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 HCN1O60741 890 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ECI2O75521 394 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 B3GAT3O94766 335 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CA1P00915 261 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 KRT14P02533 472 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CD55P08174 381 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF735P0CB33 412 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 UBTFL1P0CB47 393 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PCMT1P22061 227 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 HTR1FP30939 366 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TPMTP51580 245 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PLK1P53350 603 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PFN3P60673 137 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 VLDLRP98155 873 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CHRNB3Q05901 458 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SIGLEC14Q08ET2 396 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ASPHQ12797 758 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CUL1Q13616 776 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 LAGE3Q14657 143 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SLC5A12Q1EHB4 618 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TP53I3Q53FA7 332 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 DMRTC1Q5HYR2 192 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SPANXN2Q5MJ10 180 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SAMD4BQ5PRF9 694 aaKnown RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF691Q5VV52 312 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 LIPNQ5VXI9 398 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 RAET1LQ5VY80 246 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF57Q68EA5 555 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TMEM107Q6UX40 140 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 HSDL2Q6YN16 418 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 LRRC74BQ6ZQY2 392 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TMEM179Q6ZVK1 233 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 EIF3MQ7L2H7 374 aaKnown RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ARCQ7LC44 396 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 H2BFWTQ7Z2G1 175 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF786Q8N393 782 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TMEM105Q8N8V8 129 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 MFSD9Q8NBP5 474 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 OR1L4Q8NGR5 311 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SCFD1Q8WVM8 642 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 C10orf35Q96D05 121 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SEC22AQ96IW7 307 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SLC38A2Q96QD8 506 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 NRTNQ99748 197 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CITED1Q99966 193 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SLC35A5Q9BS91 424 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PARD6BQ9BYG5 372 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SMYD3Q9H7B4 428 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 MEPEQ9NQ76 525 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 SMOXQ9NWM0 555 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 ONECUT1Q9UBC0 465 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PRPF19Q9UMS4 504 aaKnown RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 AK6Q9Y3D8 172 aaKnown RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TIMM10BQ9Y5J6 103 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 WSB1Q9Y6I7 421 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CACNA1GO43497 2377 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 COL11A1P12107 1806 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CDK5RAP2Q96SN8 1893 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 PTPRZ1P23471 2315 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-210ENST00000553693 CACNA1BQ00975 2339 aa2.33□□□□□ -2.04
SCFD1-210ENST00000553693 TET1Q8NFU7 2136 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 PPIAL4EA0A075B759 164 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 IGHV7-81A0A0B4J1V7 117 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 IGHV2-70DA0A0C4DH43 119 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 C9JVG2 144 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 KIF2AO00139 706 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 HAS3O00219 553 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 WRBO00258 174 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 TAPBPO15533 448 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 PRKAB2O43741 272 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 OR10H3O60404 316 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 UGT1A9O60656 530 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 PFKFB2O60825 505 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ERLIN2O94905 339 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 PPIAL4FP0DN26 164 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SFTPCP11686 197 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 NCK1P16333 377 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF24P17028 368 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 CD1CP29017 333 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 IL12AP29459 219 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 NTSP30990 170 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 CCR1P32246 355 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 P2RY1P47900 373 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 CASP4P49662 377 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms