RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CERS6Q6ZMG9 384 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 MMAAQ8IVH4 418 aaKnown RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 STPG2Q8N412 459 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 LIX1Q8N485 282 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 ARIH2OSQ8N7S6 290 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CCDC54Q8NEL0 328 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 OR4C5Q8NGB2 326 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 ACTRT1Q8TDG2 376 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CXorf40AQ8TE69 158 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 IL22RA2Q969J5 263 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SMIM10Q96HG1 83 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 PKNOX2Q96KN3 472 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 FAM210BQ96KR6 192 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 TGS1Q96RS0 853 aaKnown RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CHP1Q99653 195 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CDC42EP4Q9H3Q1 356 aaKnown RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 RPF2Q9H7B2 306 aaKnown RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 STOX2Q9P2F5 926 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 PCYOX1Q9UHG3 505 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SHPKQ9UHJ6 478 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 MAP3K15Q6ZN16 1313 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 USP47Q96K76 1375 aa3.34□□□□□ -1.88
SYNE2-210ENST00000553455 NINLQ9Y2I6 1382 aa3.34□□□□□ -1.88
SYNE2-210ENST00000553455 TRAV39A0A0B4J263 110 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 HIDE1A8MVS5 230 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 LAD1O00515 517 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 PES1O00541 588 aaKnown RBP3.33□□□□□ -1.88
SYNE2-210ENST00000553455 CD5LO43866 347 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 CDH16O75309 829 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 OR2F2O95006 317 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 H6PDO95479 791 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 PNMA6AP0CW24 399 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-210ENST00000553455 HRH1P35367 487 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 CXCL5P42830 114 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 CCR6P51684 374 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 RPS15P62841 145 aaKnown RBP3.33□□□□□ -1.88
SYNE2-210ENST00000553455 TMEM183BQ1AE95 376 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 PIGGQ5H8A4 983 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 SOHLH1Q5JUK2 328 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 SPANXN2Q5MJ10 180 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 C9orf135Q5VTT2 229 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 PEX26Q7Z412 305 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 C6orf120Q7Z4R8 191 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 TMEM183AQ8IXX5 376 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 SLC7A13Q8TCU3 470 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 CD300LFQ8TDQ1 290 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 SRSF12Q8WXF0 261 aaKnown RBP3.33□□□□□ -1.88
SYNE2-210ENST00000553455 MCUR1Q96AQ8 359 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 PIK3IP1Q96FE7 263 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 P2RX4Q99571 388 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 HDHD3Q9BSH5 251 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-210ENST00000553455 MRPL37Q9BZE1 423 aaKnown RBP3.33□□□□□ -1.88
SYNE2-210ENST00000553455 WSB1Q9Y6I7 421 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 WDR62O43379 1518 aa3.33□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF816-ZNF321PA0A0X1KG74 233 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 PRSS37A4D1T9 235 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 LRRIQ3A6PVS8 624 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-210ENST00000553455 XKRYO14609 159 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 LSM1O15116 133 aaKnown RBP3.32□□□□□ -1.88
SYNE2-210ENST00000553455 AIFM1O95831 613 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 ZDHHC11BP0C7U3 371 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 GALP22466 123 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 SYKP43405 635 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 RAB10P61026 200 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 NUTF2P61970 127 aaKnown RBP3.32□□□□□ -1.88
SYNE2-210ENST00000553455 SLC7A9P82251 487 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 SMARCB1Q12824 385 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 ECH1Q13011 328 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 SELENBP1Q13228 472 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 PON3Q15166 354 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 KCTD19Q17RG1 926 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-210ENST00000553455 TTLL9Q3SXZ7 439 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 TMEM220Q6QAJ8 160 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 H2AFVQ71UI9 128 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 SCD5Q86SK9 330 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 IQCKQ8N0W5 287 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 CCDC148Q8NFR7 591 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 OR52K2Q8NGK3 314 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 OR5B3Q8NH48 314 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF502Q8TBZ5 544 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 GIMAP1Q8WWP7 306 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 NRGNQ92686 78 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 TSNARE1Q96NA8 513 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 WFIKKN1Q96NZ8 548 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 TSSK3Q96PN8 268 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 C20orf24Q9BUV8 137 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
SYNE2-210ENST00000553455 GPATCH2LQ9NWQ4 482 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 RBAKQ9NYW8 714 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-210ENST00000553455 KIAA1257Q9ULG3 409 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 NFASCO94856 1347 aa3.32□□□□□ -1.88
SYNE2-210ENST00000553455 GLYATL1P3A0A0U1RQE8 302 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 SMCO2A6NFE2 343 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 CA11O75493 328 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 SERPINA5P05154 406 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 AK4P27144 223 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-210ENST00000553455 RRM2P31350 389 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 FOXN2P32314 431 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF136P52737 540 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 SLC25A11Q02978 314 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms