RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TRIM25Q14258 630 aaKnown RBP13.31□□□□□ -0.28
SHMT2-204ENST00000553324 IQCCQ4KMZ1 466 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 TMEM53Q6P2H8 277 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 SLC16A14Q7RTX9 510 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 TRPM8Q7Z2W7 1104 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 BIVMQ86UB2 503 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 ARIH2OSQ8N7S6 290 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 OR4K5Q8NGD3 323 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 OR13C2Q8NGS9 318 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 OR52J3Q8NH60 311 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 HDAC2Q92769 488 aaKnown RBP13.31□□□□□ -0.28
SHMT2-204ENST00000553324 FAM46AQ96IP4 442 aaKnown RBP13.31□□□□□ -0.28
SHMT2-204ENST00000553324 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 CACNG6Q9BXT2 260 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 C1orf198Q9H425 327 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF442Q9H7R0 627 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 RNF121Q9H920 327 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 TMCC3Q9ULS5 477 aa13.31□□□□□ -0.28
SHMT2-204ENST00000553324 USF3Q68DE3 2245 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 TRBV4-1A0A0J9YWV2 114 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 SH3PXD2BA1X283 911 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF503-AS2A6NEH8 195 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 H7C417 338 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 XKRYO14609 159 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 PTP4A3O75365 173 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 DIRAS1O95057 198 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 NDUFB2O95178 105 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 CELA3BP08861 270 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 INHBBP09529 407 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 CALCRP30988 508 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 OMPP47874 163 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 SNRPD2P62316 118 aaKnown RBP13.3□□□□□ -0.28
SHMT2-204ENST00000553324 MRPS34P82930 218 aaKnown RBP13.3□□□□□ -0.28
SHMT2-204ENST00000553324 MYBPC1Q00872 1141 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 SPIBQ01892 262 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 PLP2Q04941 152 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 FHL1Q13642 323 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 SWI5Q1ZZU3 235 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 CLEC12BQ2HXU8 276 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 GPR139Q6DWJ6 353 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 RINLQ6ZS11 566 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 DHFR2Q86XF0 187 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 ZDHHC21Q8IVQ6 265 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 LINC00471Q8N535 108 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF75AQ96N20 296 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 SH3GL3Q99963 347 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 LRMDAQ9H2I8 198 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 TAS2R1Q9NYW7 299 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF224Q9NZL3 707 aa13.3□□□□□ -0.28
SHMT2-204ENST00000553324 MED13LQ71F56 2210 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 SLC22A23A1A5C7 686 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 OR4A8P0C604 315 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF35P13682 527 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 NR4A1P22736 598 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 LIMS1P48059 325 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 HMGA2P52926 109 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 DSCR9P59020 149 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 ERVK-25P63136 954 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 GALK2Q01415 458 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 HGFACQ04756 655 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 DAG1Q14118 895 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 EFNB3Q15768 340 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 SLC25A47Q6Q0C1 308 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 VHLLQ6RSH7 139 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 CYP2R1Q6VVX0 501 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 DPY19L2P2Q6ZN68 376 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 IGFN1Q86VF2 1251 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 MEX3DQ86XN8 651 aaKnown RBP13.29□□□□□ -0.28
SHMT2-204ENST00000553324 OR1J2Q8NGS2 313 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 ZNF519Q8TB69 540 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 NMD3Q96D46 503 aaKnown RBP13.29□□□□□ -0.28
SHMT2-204ENST00000553324 FBXO17Q96EF6 278 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-204ENST00000553324 FUZQ9BT04 418 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 WACQ9BTA9 647 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 MAGIXQ9H6Y5 334 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 NOX3Q9HBY0 568 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 CMAHPQ9Y471 501 aa13.29□□□□□ -0.28
SHMT2-204ENST00000553324 HEATR1Q9H583 2144 aaKnown RBP13.28□□□□□ -0.28
SHMT2-204ENST00000553324 IQCMA0A1B0GVH7 501 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 OR10H3O60404 316 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 SLC2A10O95528 541 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 IGHV4-39P01824 125 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 HOXB6P17509 224 aaKnown RBP13.28□□□□□ -0.28
SHMT2-204ENST00000553324 RRM2P31350 389 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 EVX1P49640 407 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 NUDT6P53370 316 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 RPS23P62266 143 aaKnown RBP13.28□□□□□ -0.28
SHMT2-204ENST00000553324 RAB39AQ14964 217 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 SEC23BQ15437 767 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 MST1LQ2TV78 715 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 FAM27BQ5VT28 67 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 NSMAFQ92636 917 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 ASB9Q96DX5 294 aa13.28□□□□□ -0.28
SHMT2-204ENST00000553324 RSRC1Q96IZ7 334 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms