RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 DCUN1D4Q92564 292 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 ZNF707Q96C28 371 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 PIK3IP1Q96FE7 263 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 OPALINQ96PE5 141 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 RGCCQ9H4X1 137 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 C8orf33Q9H7E9 229 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 NTN4Q9HB63 628 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 CHRAC1Q9NRG0 131 aa3.57□□□□□ -1.84
SCFD1-209ENST00000553280 CCDC59Q9P031 241 aaKnown RBP3.57□□□□□ -1.84
SCFD1-209ENST00000553280 MROH7-TTC4A0A0A0MT08 1334 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 A0A0B4J2A0 478 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 CLDN11O75508 207 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 OTCP00480 354 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 HPNP05981 417 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 SERPINE2P07093 398 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 UBCP0CG48 685 aaKnown RBP3.56□□□□□ -1.84
SCFD1-209ENST00000553280 PRKACAP17612 351 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 SRMP19623 302 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 KLK2P20151 261 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 TUBG1P23258 451 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 HTR1EP28566 365 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 SERPINB5P36952 375 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 CCR8P51685 355 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 DAOAP59103 153 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 RPS21P63220 83 aaKnown RBP3.56□□□□□ -1.84
SCFD1-209ENST00000553280 RAD51Q06609 339 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 DNAJC3Q13217 504 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 CLINT1Q14677 625 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 NKAIN1Q4KMZ8 207 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 PAGE3Q5JUK9 113 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 SPINK14Q6IE38 97 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 LCN12Q6JVE5 192 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 SPESP1Q6UW49 350 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 IL34Q6ZMJ4 242 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 HDDC2Q7Z4H3 204 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 JAGN1Q8N5M9 183 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 C11orf42Q8N5U0 333 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 OR4F15Q8NGB8 312 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 OR10R2Q8NGX6 335 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 JSRP1Q96MG2 331 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-209ENST00000553280 RASL11BQ9BPW5 248 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 OSBPL10Q9BXB5 764 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 ZYG11BQ9C0D3 744 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 ACTR3CQ9C0K3 210 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-209ENST00000553280 UGT1A7Q9HAW7 530 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 UGT1A8Q9HAW9 530 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 CYP3A43Q9HB55 503 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 EML4Q9HC35 981 aaKnown RBP3.56□□□□□ -1.84
SCFD1-209ENST00000553280 PXMP2Q9NR77 195 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 TUBG2Q9NRH3 451 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 SHPKQ9UHJ6 478 aa3.56□□□□□ -1.84
SCFD1-209ENST00000553280 KIF27Q86VH2 1401 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 LRRK1Q38SD2 2015 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 PHF3Q92576 2039 aaKnown RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 TRAV39A0A0B4J263 110 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 ZNF816-ZNF321PA0A0X1KG74 233 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 M0R3G1 203 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 HDAC3O15379 428 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 AIREO43918 545 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 C6orf47O95873 294 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 CD160O95971 181 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 CSF3P09919 207 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 AK4P27144 223 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 RBMXP38159 391 aaKnown RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 TNFSF9P41273 254 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 SLC1A2P43004 574 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 CRISP1P54107 249 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 NUP107P57740 925 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 STXBP1P61764 594 aaKnown RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 SLC25A11Q02978 314 aaKnown RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 TWF1Q12792 350 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 TRAM2Q15035 370 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 ZNF239Q16600 458 aaKnown RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 LRRC10Q5BKY1 277 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 OR52E5Q8NH55 327 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 MYDGFQ969H8 173 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 RHBDD3Q9Y3P4 386 aa3.55□□□□□ -1.84
SCFD1-209ENST00000553280 COL22A1Q8NFW1 1626 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-209ENST00000553280 ARHGAP23Q9P227 1491 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 RLFQ13129 1914 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 IGLV3-10A0A075B6K4 115 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 F6UB75 175 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 H3BNH8 94 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 NPIPB7O75200 414 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 TNFSF13O75888 250 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 LY6G6DO95868 133 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 HLA-HP01893 362 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 CRYGCP07315 174 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 ACSM4P0C7M7 580 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 IGHV3-43DP0DP04 118 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 MGMTP16455 207 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 CPN2P22792 545 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 FGF8P55075 233 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-209ENST00000553280 LYZP61626 148 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 HERPUD1Q15011 391 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 IL17AQ16552 155 aa3.54□□□□□ -1.84
SCFD1-209ENST00000553280 C6orf89Q6UWU4 347 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms