RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	CREB3L2	Q70SY1	520 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	TUBA1A	Q71U36	451 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	TRIL	Q7L0X0	811 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	KCTD20	Q7Z5Y7	419 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	CPNE4	Q96A23	557 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	SMAD5	Q99717	465 aa	Known RBP	11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	CENPO	Q9BU64	300 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	TTTY10	Q9BZA0	68 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	DCSTAMP	Q9H295	470 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	SLC6A15	Q9H2J7	730 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	EXOSC4	Q9NPD3	245 aa	Known RBP	11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	MRPL22	Q9NWU5	206 aa	Known RBP	11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	LAMP5	Q9UJQ1	280 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	MSRB2	Q9Y3D2	182 aa		11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNB3-223	ENST00000552480	IGKV1D-43	A0A0B4J1Z2	117 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	TRDV1	A0A1B0GX56	115 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF593	O00488	134 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	GAA	P10253	952 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF708	P17019	499 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	ALOX5AP	P20292	161 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	GAL	P22466	123 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	EIF1AX	P47813	144 aa	Known RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	CLDN15	P56746	228 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	CLDN18	P56856	261 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	EGR3	Q06889	387 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	MRPL28	Q13084	256 aa	Known RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	SLC10A1	Q14973	349 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	TRAM1	Q15629	374 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	BCL2A1	Q16548	175 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	HIST3H3	Q16695	136 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	DGUOK	Q16854	277 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	CCDC58	Q4VC31	144 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	SLC25A47	Q6Q0C1	308 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	CD200R1L	Q6Q8B3	271 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	DPY19L4	Q7Z388	723 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	FAM220A	Q7Z4H9	259 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	MEIOB	Q8N635	442 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF454	Q8N9F8	522 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	SLC26A10	Q8NG04	563 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	OTOS	Q8NHW6	89 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	HAVCR2	Q8TDQ0	301 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	ASB17	Q8WXJ9	295 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	PELI1	Q96FA3	418 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	TRMT61A	Q96FX7	289 aa	Known RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	FOXN4	Q96NZ1	517 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	COQ7	Q99807	217 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	RNF167	Q9H6Y7	350 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	TXNL4B	Q9NX01	149 aa	Known RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	KLHL9	Q9P2J3	617 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	ST6GALNAC2	Q9UJ37	374 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	GNG8	Q9UK08	70 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	SSUH2	Q9Y2M2	353 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	KLHDC2	Q9Y2U9	406 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	CSAG2	Q9Y5P2	127 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	KIAA1549	Q9HCM3	1950 aa		11.3	□□□□□ -0.6
CACNB3-223	ENST00000552480	METTL15	A6NJ78	407 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	HSPB2	A8KAH6	182 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	PRR32	B1ATL7	298 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480		E9PI62	339 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	OGG1	O15527	345 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	PLPP2	O43688	288 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	SULT1C4	O75897	302 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ACTL6A	O96019	429 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	HRG	P04196	525 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	HLA-DPB1	P04440	258 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	CD1A	P06126	327 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	TACSTD2	P09758	323 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	PSKH1	P11801	424 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF823	P16415	610 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	LAP3	P28838	519 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	FGF9	P31371	208 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	SERPINB10	P48595	397 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	TGM4	P49221	684 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ADAM8	P78325	824 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	HSPB2	Q16082	182 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	TEX30	Q5JUR7	227 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	CARD17	Q5XLA6	110 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	DMKN	Q6E0U4	476 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	RPL22L1	Q6P5R6	122 aa	Known RBP	11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	GLB1L2	Q8IW92	636 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	TMEM123	Q8N131	208 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZIC4	Q8N9L1	334 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	NEIL3	Q8TAT5	605 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ABTB1	Q969K4	478 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	TMEM54	Q969K7	222 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	PNPLA2	Q96AD5	504 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	OR2M2	Q96R28	347 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	TMED9	Q9BVK6	235 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZDHHC11	Q9H8X9	412 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	CCDC59	Q9P031	241 aa	Known RBP	11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	KCNG2	Q9UJ96	466 aa		11.29	□□□□□ -0.6
CACNB3-223	ENST00000552480	ZNF716	A6NP11	495 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	MAGEB4	O15481	346 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	LRRTM2	O43300	516 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	CYTIP	O60759	359 aa		11.28	□□□□□ -0.6
CACNB3-223	ENST00000552480	RGS9	O75916	674 aa	Predicted RBP	11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms