RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 SLC10A1Q14973 349 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 QPRTQ15274 297 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 NPTX1Q15818 432 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 CLEC12BQ2HXU8 276 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 PLPPR5Q32ZL2 321 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 IQCCQ4KMZ1 466 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 FAM98BQ52LJ0 330 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 LIPNQ5VXI9 398 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 MORN5Q5VZ52 161 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 WBP2NLQ6ICG8 309 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF613Q6PF04 617 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 Q6ZWC4 215 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF771Q7L3S4 317 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 PIWIL3Q7Z3Z3 882 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 CARM1Q86X55 608 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 LACC1Q8IV20 430 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 C10orf67Q8IYJ2 551 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM251Q8N6I4 163 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 TMCO5AQ8N6Q1 288 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 FAM86B1Q8N7N1 296 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 NAXEQ8NCW5 288 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 PAPD5Q8NDF8 572 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 FAM83FQ8NEG4 500 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 OR4D11Q8NGI4 311 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 OR6T1Q8NGN1 323 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 OR5M9Q8NGP3 310 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 CANT1Q8WVQ1 401 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 SMPDL3BQ92485 455 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC47A1Q96FL8 570 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 SH3YL1Q96HL8 342 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 JSRP1Q96MG2 331 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 KLHDC3Q9BQ90 382 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 TRIM2Q9C040 744 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 DENND2DQ9H6A0 471 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 C12orf10Q9HB07 376 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 ACER3Q9NUN7 267 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF701Q9NV72 531 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 MED17Q9NVC6 651 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 ACAD8Q9UKU7 415 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 ENPP4Q9Y6X5 453 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 COL7A1Q02388 2944 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 PRR14LQ5THK1 2151 aa5.69□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1B0GVC2 190 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 NPIPA2E9PIF3 369 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 NPIPA3F8WFD2 350 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TFECO14948 347 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 GMFGO60234 142 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 HCN1O60741 890 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TRAPPC6AO75865 159 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 FABP3P05413 133 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 THRBP10828 461 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 SRD5A1P18405 259 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 RHCEP18577 417 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TNFRSF1BP20333 461 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 CHMP24386 653 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 FKBP2P26885 142 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 HTR2AP28223 471 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ELK4P28324 431 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC7A1P30825 629 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 RYKP34925 604 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 APOBEC1P41238 236 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 MAGEA5P43359 124 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 HTR3AP46098 478 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 IDH2P48735 452 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 AGFG1P52594 562 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 B3GALT5-AS1P59052 145 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 COPZ1P61923 177 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 VLDLRP98155 873 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 CHRNB3Q05901 458 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 KPNB1Q14974 876 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TOMM20Q15388 145 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 OR1Q1Q15612 314 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TOMM34Q15785 309 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 NHSL2Q5HYW2 709 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ENTPD8Q5MY95 495 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF626Q68DY1 528 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZFP1Q6P2D0 407 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ULK3Q6PHR2 472 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 B3GNT6Q6ZMB0 384 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 GRINAQ7Z429 371 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TSEN54Q7Z6J9 526 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 CYP4Z1Q86W10 505 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 SPATA24Q86W54 205 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 RBM45Q8IUH3 476 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZDHHC21Q8IVQ6 265 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 GTPBP8Q8N3Z3 284 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF563Q8TA94 476 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 VANGL1Q8TAA9 524 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ADAMTS16Q8TE57 1224 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 DNAJA4Q8WW22 397 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC38A4Q969I6 547 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 RPL36ALQ969Q0 106 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 SLCO4A1Q96BD0 722 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF524Q96C55 264 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 PRRC1Q96M27 445 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF300Q96RE9 604 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF347Q96SE7 839 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms