RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 P2RX1P51575 399 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SIRPAP78324 504 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 C17orf67Q0P5P2 114 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 KRT72Q14CN4 511 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 QPRTQ15274 297 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 NPTX1Q15818 432 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 GLIPR1L2Q4G1C9 344 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 C6orf163Q5TEZ5 329 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 PLEKHM3Q6ZWE6 761 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 R3HCC1LQ7Z5L2 792 aaKnown RBP4.24□□□□□ -1.73
SCAF11-214ENST00000550893 MOGAT3Q86VF5 341 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 PTOV1Q86YD1 416 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ZIC4Q8N9L1 334 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 OR4D11Q8NGI4 311 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 OR4A15Q8NGL6 344 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 OR10Q1Q8NGQ4 319 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 OR2V1Q8NHB1 315 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 CEP70Q8NHQ1 597 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 RFWD2Q8NHY2 731 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 RAB3IL1Q8TBN0 382 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 FAM222BQ8WU58 562 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ROBO4Q8WZ75 1007 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SMPDL3BQ92485 455 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 MAL2Q969L2 176 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ROPN1LQ96C74 230 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 RNFT2Q96EX2 444 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 DNAJA3Q96EY1 480 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ATP6V1G3Q96LB4 118 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 KLHL15Q96M94 604 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ZFP3Q96NJ6 502 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SLC35A5Q9BS91 424 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SLC25A33Q9BSK2 321 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 RBM24Q9BX46 236 aaKnown RBP4.24□□□□□ -1.73
SCAF11-214ENST00000550893 TBL1XR1Q9BZK7 514 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 IQCGQ9H095 443 aaKnown RBP4.24□□□□□ -1.73
SCAF11-214ENST00000550893 EXO5Q9H790 373 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 EML4Q9HC35 981 aaKnown RBP4.24□□□□□ -1.73
SCAF11-214ENST00000550893 PLSCR4Q9NRQ2 329 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 KLHL28Q9NXS3 571 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 COQ3Q9NZJ6 369 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 VAPAQ9P0L0 249 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SEC14L4Q9UDX3 406 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 PLEKHA6Q9Y2H5 1048 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SNX8Q9Y5X2 465 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 AP4B1Q9Y6B7 739 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 USH1CQ9Y6N9 552 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 STAB1Q9NY15 2570 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 IGKV3D-15A0A087WSY6 115 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 A0A087WZY1 265 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 TMEM72A0PK05 275 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 B9A039 149 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 FAAHO00519 579 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 FBP2O00757 339 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 TPST1O60507 370 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CYTIPO60759 359 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CRHP06850 196 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 TUBBP07437 444 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 IGFBP1P08833 259 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 UBTFL6P0CB48 400 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 ZCCHC18P0CG32 403 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 UBL4AP11441 157 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 UQCRC2P22695 453 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 DCTDP32321 178 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 SFTPDP35247 375 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CD79BP40259 229 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 RPP38P78345 283 aaKnown RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 LGALS3BPQ08380 585 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 SPOCK1Q08629 439 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 EPS8Q12929 822 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 FOXD4Q12950 439 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 TOMM20Q15388 145 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 GPR68Q15743 365 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 MRPL2Q5T653 305 aaKnown RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 B3GLCTQ6Y288 498 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 WDR88Q6ZMY6 472 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 DNM1P46Q6ZS02 220 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 H1FNTQ75WM6 255 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 SZRD1Q7Z422 152 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 MTERF4Q7Z6M4 381 aaKnown RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 PATL1Q86TB9 770 aaKnown RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 MYPOPQ86VE0 399 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 VRK2Q86Y07 508 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 GRAMD2AQ8IUY3 354 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 TUSC5Q8IXB3 177 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF619Q8N2I2 560 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CIARTQ8N365 385 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 GPR32P1Q8NGA4 272 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 OR6K3Q8NGY3 331 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 OR5W2Q8NH69 310 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 SLC38A5Q8WUX1 472 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CKAP2Q8WWK9 683 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 MOAP1Q96BY2 351 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 SMR3AQ99954 134 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 FOXC2Q99958 501 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF559Q9BR84 538 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 THUMPD3Q9BV44 507 aaKnown RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 C1QTNF4Q9BXJ3 329 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms