RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 IGLV3-9A0A075B6K5 115 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 TRAV20A0A0B4J274 112 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 M0R3H8 397 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 MGRN1O60291 552 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 ZNF500O60304 480 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 ERLIN1O75477 346 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SERPINI2O75830 405 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 NCR1O76036 304 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 FARS2O95363 451 aaKnown RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 SNAP29O95721 258 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 PTHP01270 115 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 VIMP08670 466 aaKnown RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 ASAH2BP0C7U1 165 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 PGA4P0DJD7 388 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 PGA3P0DJD8 388 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 GAAP10253 952 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 NAT2P11245 290 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 ZNF250P15622 560 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 TCN1P20061 433 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 COL8A2P25067 703 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 ALDH3B1P43353 468 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SEC24CP53992 1094 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 BIDP55957 195 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SELENOVP59797 346 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 RBBP4Q09028 425 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 MAD2L1BPQ15013 274 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 ZNF74Q16587 644 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 PCGF3Q3KNV8 242 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 RGS7BPQ6MZT1 257 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 TTC33Q6PID6 262 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 DLEU7Q6UYE1 221 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 WDR88Q6ZMY6 472 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SLC35D2Q76EJ3 337 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 LRP11Q86VZ4 500 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SLC30A8Q8IWU4 369 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SLC30A7Q8NEW0 376 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SEMA6DQ8NFY4 1073 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 ADAMTS16Q8TE57 1224 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 YIPF5Q969M3 257 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 MPP4Q96JB8 637 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 LRRC37BQ96QE4 947 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 EBF4Q9BQW3 602 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 ZNF426Q9BUY5 554 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 PCDHAC1Q9H158 963 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 RABEP2Q9H5N1 569 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 METTL17Q9H7H0 456 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 NANSQ9NR45 359 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 ZNF275Q9NSD4 429 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 TMEM38BQ9NVV0 291 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 HIF1ANQ9NWT6 349 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 SLCO1C1Q9NYB5 712 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 TAS2R5Q9NYW4 299 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 MYEF2Q9P2K5 600 aaKnown RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.52□□□□□ -1.37
NEK3-201ENST00000550331 ZNF229Q9UJW7 825 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 FZR1Q9UM11 496 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 PKD1L1Q8TDX9 2849 aa6.52□□□□□ -1.37
NEK3-201ENST00000550331 TRAPPC13A5PLN9 417 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 C17orf100A8MU93 164 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 CENPBD1B2RD01 187 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 FAM157AC9JC47 383 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 C11orf98E9PRG8 122 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 DHHO43323 396 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PPIHO43447 177 aaKnown RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 RNF13O43567 381 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 LYPD3O95274 346 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 CH25HO95992 272 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PNPP00491 289 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 IGHG1P01857 330 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PATE4P0C8F1 98 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 ANPEPP15144 967 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 RAD52P43351 418 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 KLF3P57682 345 aaPredicted RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 ACTG1P63261 375 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 MYBPC1Q00872 1141 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 TEKQ02763 1124 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 NPTX1Q15818 432 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 MOGQ16653 247 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 HIST3H3Q16695 136 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 DUSP7Q16829 419 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 CYP51A1Q16850 503 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 NKPD1Q17RQ9 610 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 SLC36A2Q495M3 483 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 AGKQ53H12 422 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 OXLD1Q5BKU9 147 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 ENTPD8Q5MY95 495 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 TMEM53Q6P2H8 277 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 SHQ1Q6PI26 577 aaKnown RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 LRFN4Q6PJG9 635 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 DHDDSQ86SQ9 333 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PATL1Q86TB9 770 aaKnown RBP6.51□□□□□ -1.37
NEK3-201ENST00000550331 CARM1Q86X55 608 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 PTOV1Q86YD1 416 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 DPP10Q8N608 796 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 C3orf56Q8N813 242 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 SMYD1Q8NB12 490 aa6.51□□□□□ -1.37
NEK3-201ENST00000550331 GPR32P1Q8NGA4 272 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms