RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KRT71Q3SY84 523 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC36A2Q495M3 483 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 LRIF1Q5T3J3 769 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 HHATQ5VTY9 493 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 NXNQ6DKJ4 435 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 TMEM53Q6P2H8 277 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF613Q6PF04 617 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 RBMS3Q6XE24 437 aaKnown RBP8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC35D2Q76EJ3 337 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 C1orf174Q8IYL3 243 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 MIER2Q8N344 545 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 MREGQ8N565 214 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 C10orf53Q8N6V4 93 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 GOLGA6L1Q8N7Z2 621 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 NFKBIDQ8NI38 313 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF566Q969W8 418 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 ELMOD3Q96FG2 381 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 GPA33Q99795 319 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 RNF121Q9H920 327 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 CDH20Q9HBT6 801 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 KCNK9Q9NPC2 374 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC25A37Q9NYZ2 338 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 KLHL21Q9UJP4 597 aa8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 POLR3KQ9Y2Y1 108 aaPredicted RBP8.36□□□□□ -1.07
TRAFD1-207ENST00000550051 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 IQCMA0A1B0GVH7 501 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 C11orf98E9PRG8 122 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 UBDO15205 165 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 TPD52L2O43399 206 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 FMO6PO60774 539 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 FOXH1O75593 365 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SERPINB7O75635 380 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 MMP7P09237 267 aaPredicted RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 QDPRP09417 244 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 PGA4P0DJD7 388 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 PGA3P0DJD8 388 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 GPX2P18283 190 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 DRD4P21917 467 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 PPIBP23284 216 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 LIPAP38571 399 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 MRPL19P49406 292 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF81P51508 661 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 MMP15P51511 669 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF133P52736 654 aaPredicted RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 RGS8P57771 180 aaPredicted RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 ERVS71-1P61550 626 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 NCALDP61601 193 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 RELBQ01201 579 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC3A1Q07837 685 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 OCLNQ16625 522 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 TSTQ16762 297 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 WDR93Q6P2C0 686 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC2A7Q6PXP3 512 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 TREML4Q6UXN2 200 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC16A14Q7RTX9 510 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 RANBP3LQ86VV4 465 aaPredicted RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 LRRC17Q8N6Y2 441 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 CPEB3Q8NE35 698 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 OR9I1Q8NGQ6 314 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 CCL17Q92583 94 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 POP5Q969H6 163 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF607Q96SK3 696 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SEPHS2Q99611 448 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 PAIP2Q9BPZ3 127 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 WFDC6Q9BQY6 131 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 MRPL13Q9BYD1 178 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SLITRK2Q9H156 845 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 TMEM38AQ9H6F2 299 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 ZMAT3Q9HA38 289 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 SAP30LQ9HAJ7 183 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 LEF1Q9UJU2 399 aaPredicted RBP8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 NUP50Q9UKX7 468 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 PPIAL4AQ9Y536 164 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 CACNG2Q9Y698 323 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 TANC2Q9HCD6 1990 aa8.35□□□□□ -1.07
TRAFD1-207ENST00000550051 CENPBD1B2RD01 187 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 CLDN34H7C241 214 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 CHP2O43745 196 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 IGHV1-46P01743 117 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 KITP10721 976 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 SLC6A2P23975 617 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 ZFP36P26651 326 aaKnown RBP8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 ATP4BP51164 291 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 LCN2P80188 198 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 DEFA6Q01524 100 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF74Q16587 644 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 ZNF718Q3SXZ3 478 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 GCNT6Q5T4J0 391 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 UNQ6126/PRO20091Q6UXV3 157 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 MSRB3Q8IXL7 192 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 C10orf111Q8N326 155 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 SIGLECL1Q8N7X8 197 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 RBM15BQ8NDT2 890 aaKnown RBP8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 OR1J1Q8NGS3 322 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 ST7LQ8TDW4 575 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 C22orf15Q8WYQ4 148 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 MCHR2Q969V1 340 aa8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 MARS2Q96GW9 593 aaKnown RBP8.34□□□□□ -1.07
TRAFD1-207ENST00000550051 OR52B2Q96RD2 323 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms