RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 C11orf40Q8WZ69 217 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 RAB39BQ96DA2 213 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 MPP4Q96JB8 637 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 CPPED1Q9BRF8 314 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-218ENST00000548945 ZNF426Q9BUY5 554 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 BCL2L14Q9BZR8 327 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 LRMDAQ9H2I8 198 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 ZNF665Q9H7R5 613 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 CDH20Q9HBT6 801 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 LPAR2Q9HBW0 351 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 G6PC2Q9NQR9 355 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-218ENST00000548945 PCDHB10Q9UN67 800 aa10.98□□□□□ -0.65
PTCH1-218ENST00000548945 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 ARHGAP32A7KAX9 2087 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 A0A0G2JMP0 313 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 A0A0X1KG70 313 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 TRIM77I1YAP6 450 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 J3QLI3 93 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 M0R3H8 397 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 LYPD3O95274 346 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 CH25HO95992 272 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 CLPTM1O96005 669 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 IGHG1P01857 330 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 MT-ND5P03915 603 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 HIST1H2ABP04908 130 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 EPHA1P21709 976 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 MAGEB1P43366 347 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 LIMS1P48059 325 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 ARFIP2P53365 341 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 UCP2P55851 309 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 ACTG1P63261 375 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 CCL8P80075 99 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 PLP2Q04941 152 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 HIST3H3Q16695 136 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 DUSP7Q16829 419 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 RUNDC3AQ59EK9 446 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 FAM209AQ5JX71 171 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 ENTPD8Q5MY95 495 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 FAHD2BQ6P2I3 314 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-218ENST00000548945 TTC33Q6PID6 262 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-218ENST00000548945 DLEU7Q6UYE1 221 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 HIST3H2AQ7L7L0 130 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 SLC16A14Q7RTX9 510 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 HDDC2Q7Z4H3 204 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 PTOV1Q86YD1 416 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 SLC30A8Q8IWU4 369 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 PAQR4Q8N4S7 273 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-218ENST00000548945 SMYD1Q8NB12 490 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 OR4M2Q8NGB6 313 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 OR4K5Q8NGD3 323 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 OR6T1Q8NGN1 323 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 ADAMTS16Q8TE57 1224 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 HIST1H2ACQ93077 130 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 FAHD2AQ96GK7 314 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 SEPHS2Q99611 448 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 SH3GL3Q99963 347 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 RBM4Q9BWF3 364 aaKnown RBP10.97□□□□□ -0.65
PTCH1-218ENST00000548945 PCDHAC1Q9H158 963 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 TRIM33Q9UPN9 1127 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 ARL2BPQ9Y2Y0 163 aa10.97□□□□□ -0.65
PTCH1-218ENST00000548945 IGHV1-69-2A0A0G2JMI3 117 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 IQCMA0A1B0GVH7 501 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 TRAPPC13A5PLN9 417 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 CPSF4LA6NMK7 179 aaKnown RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 SPRY1O43609 319 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 DEAF1O75398 565 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 BCL10O95999 233 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 LCKP06239 509 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 QDPRP09417 244 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 ASAH2BP0C7U1 165 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 FAM157BP0CG42 384 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 GATA3P23771 443 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 ZNF84P51523 738 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 ZNF133P52736 654 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 NPTX1Q15818 432 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 AGKQ53H12 422 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 C1orf229Q6ZS94 237 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 PATL1Q86TB9 770 aaKnown RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 PEG10Q86TG7 708 aaKnown RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 DPP10Q8N608 796 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 RBM15BQ8NDT2 890 aaKnown RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 GPR32P1Q8NGA4 272 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 C10orf82Q8WW14 230 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 GCDHQ92947 438 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 EBF4Q9BQW3 602 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 MRPL13Q9BYD1 178 aaKnown RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 RNF121Q9H920 327 aa10.96□□□□□ -0.65
PTCH1-218ENST00000548945 LEF1Q9UJU2 399 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-218ENST00000548945 TRRAPQ9Y4A5 3859 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 A0A0G2JND7 137 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 CLDN25C9JDP6 229 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms