RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 DOK2O60496 412 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 TSPAN9O75954 239 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 WISP1O95388 367 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 FGF2P09038 288 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ASAH2BP0C7U1 165 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 AKAIN1P0CW23 69 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 HPGDP15428 266 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 HNRNPA2B1P22626 353 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 C1orf61Q13536 156 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ARHGAP40Q5TG30 622 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ASPHD2Q6ICH7 369 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 TMEM205Q6UW68 189 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ARHGEF39Q8N4T4 335 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 HERVK_113Q902F9 699 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 MCHR2Q969V1 340 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 GABRG3Q99928 467 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 PRTFDC1Q9NRG1 225 aa12.8□□□□□ -0.36
RAPGEF3-218ENST00000548919 TMEM212A6NML5 194 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 C11orf98E9PRG8 122 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 M0QYG6 137 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 PLGP00747 810 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 IFI6P09912 130 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 RNH1P13489 461 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 PSMD4P55036 377 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 C1QL3Q5VWW1 255 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 TAAR8Q969N4 342 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 C4orf45Q96LM5 186 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 INTS14Q96SY0 518 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 ELOVL3Q9HB03 270 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 MED9Q9NWA0 146 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 KRBOX1C9JBD0 128 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 TMEM127O75204 238 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 ACHEP22303 614 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 CSF2RBP32927 897 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 PRSS3P35030 304 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 SKP2Q13309 424 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 STEAP1BQ6NZ63 245 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 CDH26Q8IXH8 852 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 PDZD9Q8IXQ8 264 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 SLC22A18ASQ8N1D0 253 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 OR13H1Q8NG92 308 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 ARPC5LQ9BPX5 153 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 RTN4RQ9BZR6 473 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 B3GNT4Q9C0J1 378 aa12.79□□□□□ -0.36
RAPGEF3-218ENST00000548919 ATG2AQ2TAZ0 1938 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 COL4A2P08572 1712 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 PNPP00491 289 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 NAT1P18440 290 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 UBE2IP63279 158 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF273Q14593 569 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 MEP1BQ16820 701 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 OOSP2Q86WS3 158 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 PRR22Q8IZ63 422 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF615Q8N8J6 731 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZSCAN1Q8NBB4 408 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 CLEC1AQ8NC01 280 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 OR52H1Q8NGJ2 320 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 OR5M9Q8NGP3 310 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 MRGPRX1Q96LB2 322 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 DPYSL5Q9BPU6 564 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZC4H2Q9NQZ6 224 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 FBXO4Q9UKT5 387 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 SDC3O75056 442 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 WNT11O96014 354 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 GUSBP08236 651 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 PNMTP11086 282 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 TACR3P29371 465 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 CALCRP30988 508 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 FNTBP49356 437 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 ARHGDIBP52566 201 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 UBXN2BQ14CS0 331 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 RAB11BQ15907 218 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 TFAP2EQ6VUC0 442 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 C17orf107Q6ZR85 190 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 MDGA2Q7Z553 956 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 NAXDQ8IW45 347 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF563Q8TA94 476 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
RAPGEF3-218ENST00000548919 TRAV14DV4A0A0A6YYC5 116 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 LINC01565O15544 149 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 APOC3P02656 99 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 LIPCP11150 499 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 ICAM2P13598 275 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 MPGP29372 298 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 GMFBP60983 142 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 EEF1A1P5Q5VTE0 462 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF627Q7L945 461 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 KRT77Q7Z794 578 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 GABRG1Q8N1C3 465 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms