RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 SLC43A2Q8N370 569 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 SCAIQ8N9R8 606 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 NUBPLQ8TB37 319 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 CENPMQ9NSP4 180 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 SLC39A1Q9NY26 324 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 KLHL13Q9P2N7 655 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 NPIPA1Q9UND3 350 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 HS3ST3B1Q9Y662 390 aa9.95□□□□□ -0.82
CUX1-212ENST00000547394 IGLV1-36A0A0B4J1U3 117 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 SMLR1H3BR10 107 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 LMX1BO60663 402 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 SLC43A1O75387 559 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 CCL3P10147 92 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 APEHP13798 732 aaKnown RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 OTX2P32243 289 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 BIDP55957 195 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 MFAP5Q13361 173 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 IL10RAQ13651 578 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 EFR3AQ14156 821 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TOMM20Q15388 145 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 ISXQ2M1V0 245 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 ATAD3CQ5T2N8 411 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 B3GNTL1Q67FW5 361 aaPredicted RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 GPR139Q6DWJ6 353 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TMPRSS12Q86WS5 348 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 LRRC28Q86X40 367 aaPredicted RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 CMTM4Q8IZR5 234 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 WDSUB1Q8N9V3 476 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 OTOSQ8NHW6 89 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 RANGRFQ9HD47 186 aaPredicted RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 WIF1Q9Y5W5 379 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 R4GN57 208 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 ARL6IP5O75915 188 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 NPR2P20594 1047 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 GPR176Q14439 515 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TMEM176BQ3YBM2 270 aaPredicted RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 FAAP20Q6NZ36 180 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 PLET1Q6UQ28 207 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TMEM205Q6UW68 189 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TSEN15Q8WW01 171 aaKnown RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 TMEM234Q8WY98 164 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 SPACA9Q96E40 222 aaPredicted RBP9.94□□□□□ -0.82
CUX1-212ENST00000547394 LRFN5Q96NI6 719 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 ABHD6Q9BV23 337 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 ABCG5Q9H222 651 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 CDCP1Q9H5V8 836 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 TEKT2Q9UIF3 430 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 MOKQ9UQ07 419 aa9.94□□□□□ -0.82
CUX1-212ENST00000547394 ZFHX2Q9C0A1 2572 aaPredicted RBP9.93□□□□□ -0.82
CUX1-212ENST00000547394 OR4C45A6NMZ5 311 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 SLC19A2O60779 497 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 CER1O95813 267 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 MT-ATP6P00846 226 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 SERPINA3P01011 423 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 ANOS1P23352 680 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 HOXA6P31267 233 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 CCR6P51684 374 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 HSF1Q00613 529 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 RSPO4Q2I0M5 234 aaPredicted RBP9.93□□□□□ -0.82
CUX1-212ENST00000547394 PLPPR5Q32ZL2 321 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 LRFN4Q6PJG9 635 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 STAC2Q6ZMT1 411 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 TRILQ7L0X0 811 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 KRT77Q7Z794 578 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 GLB1L2Q8IW92 636 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 OR5L2Q8NGL0 311 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 SETD6Q8TBK2 473 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 CCNL2Q96S94 520 aaPredicted RBP9.93□□□□□ -0.82
CUX1-212ENST00000547394 RNF121Q9H920 327 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 TCF7L1Q9HCS4 588 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 ADAM30Q9UKF2 790 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 EMC9Q9Y3B6 208 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 A0A0G2JMM0 328 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 A0A1W2PPB8 328 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 A0A1W2PRS3 328 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 KIR3DP1A8MWS1 328 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 MT-ND4P03905 459 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 SYPP08247 313 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 FGF5P12034 268 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 GALP22466 123 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 GPR85P60893 370 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 TRAM1Q15629 374 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 H1FNTQ75WM6 255 aaPredicted RBP9.93□□□□□ -0.82
CUX1-212ENST00000547394 LINGO2Q7L985 606 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 NUP54Q7Z3B4 507 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 DCXRQ7Z4W1 244 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 TPRA1Q86W33 373 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 PLPP7Q8NBV4 271 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 ZNF248Q8NDW4 579 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 OR4K17Q8NGC6 315 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 CAPSLQ8WWF8 208 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 RFT1Q96AA3 541 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 FRMD6Q96NE9 622 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 SEC61A2Q9H9S3 476 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 C12orf10Q9HB07 376 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 EMC7Q9NPA0 242 aa9.93□□□□□ -0.82
CUX1-212ENST00000547394 PISDQ9UG56 409 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms