RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 SLC25A47Q6Q0C1 308 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 TFAP2EQ6VUC0 442 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 Q6ZT83 130 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 SSX8Q7RTT4 187 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 DPPA2Q7Z7J5 298 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 PROKR2Q8NFJ6 384 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 RND1Q92730 232 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 MCHR2Q969V1 340 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 BOD1Q96IK1 185 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 USB1Q9BQ65 265 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 NUAK2Q9H093 628 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 MARCH7Q9H992 704 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 UPB1Q9UBR1 384 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 PROCRQ9UNN8 238 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 GPR52Q9Y2T5 361 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 ZNF462Q96JM2 2506 aa14.16□□□□□ -0.14
PRPF40A-212ENST00000545856 TRGV8A0A0C4DH27 118 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 MSTNO14793 375 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 DHHO43323 396 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 SLC16A7O60669 478 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 ENTPD6O75354 484 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 KRT33AO76009 404 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 TOXO94900 526 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 TNFAIP8O95379 198 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 QDPRP09417 244 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 MRPS34P82930 218 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 TGFBR3Q03167 851 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 TLE1Q04724 770 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 P2RY6Q15077 328 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 KCNMB1Q16558 191 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 KCTD21Q4G0X4 260 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 BEND4Q6ZU67 534 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 GLB1L2Q8IW92 636 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 CCDC36Q8IYA8 594 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 OR6V1Q8N148 313 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 SYT14Q8NB59 555 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 CYB561A3Q8NBI2 242 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 C1orf162Q8NEQ5 155 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 TEAD3Q99594 435 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 MOV10Q9HCE1 1003 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 INPP5EQ9NRR6 644 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 MYRFQ9Y2G1 1151 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 SMG1Q96Q15 3661 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 MYO7BQ6PIF6 2116 aa14.15□□□□□ -0.14
PRPF40A-212ENST00000545856 FAM183AA6NL82 134 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC1A7O00341 560 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 FADS2O95864 444 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 HOXB1P14653 301 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 CTLA4P16410 223 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 LAP3P28838 519 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 MPGP29372 298 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 SLC15A1P46059 708 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 ACTC1P68032 377 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 ACTA1P68133 377 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 HSF2Q03933 536 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 APOFQ13790 326 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 TEX30Q5JUR7 227 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 TSPO2Q5TGU0 170 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 LRFN4Q6PJG9 635 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 NUFIP2Q7Z417 695 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 MRGPRGQ86SM5 289 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 LSRQ86X29 649 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 GCNT2Q8N0V5 402 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF843Q8N446 348 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 CNEP1R1Q8N9A8 125 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 ASB5Q8WWX0 329 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 STARD4Q96DR4 205 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 BBC3Q96PG8 261 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 JAM3Q9BX67 310 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 DNAJC27Q9NZQ0 273 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 CLEC4AQ9UMR7 237 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 OSGIN2Q9Y236 505 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 TMEM14AQ9Y6G1 99 aa14.14□□□□□ -0.15
PRPF40A-212ENST00000545856 DIDO1Q9BTC0 2240 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF99A8MXY4 864 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 H7C1C5 153 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 PHYHO14832 338 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 TMCC2O75069 709 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 CGAP01215 116 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 DBTP11182 482 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 COX5AP20674 150 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 NTF4P34130 210 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 CAPZA2P47755 286 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 CHN2P52757 468 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 RPS7P62081 194 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 LSM6P62312 80 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 LCN6P62502 163 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 ZNF91Q05481 1191 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 PMPCAQ10713 525 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 C4orf17Q53FE4 359 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 KLHL12Q53G59 568 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 LINC01590Q5TEZ4 76 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 RNLSQ5VYX0 342 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 CNIH3Q8TBE1 160 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 KISS1RQ969F8 398 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 UBE2FQ969M7 185 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 OTULINQ96BN8 352 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 CNN2Q99439 309 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 OR51V1Q9H2C8 321 aa14.13□□□□□ -0.15
PRPF40A-212ENST00000545856 NELFAQ9H3P2 528 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms