RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C10orf128Q5T292 105 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 CYP2R1Q6VVX0 501 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 SLC16A14Q7RTX9 510 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 BIVMQ86UB2 503 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 MYPOPQ86VE0 399 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-216ENST00000544996 DHFR2Q86XF0 187 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 ARIH2OSQ8N7S6 290 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
CCDC78-216ENST00000544996 TSPAN32Q96QS1 320 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 RNF121Q9H920 327 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF224Q9NZL3 707 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 TMCC3Q9ULS5 477 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
CCDC78-216ENST00000544996 CADP27708 2225 aa13.64□□□□□ -0.23
CCDC78-216ENST00000544996 SH3PXD2BA1X283 911 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 TRIM64A6NGJ6 449 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 TRIM64BA6NI03 449 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 H7C1Q1 480 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 H7C417 338 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 XKRYO14609 159 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 PDE5AO76074 875 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 NDUFB2O95178 105 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 SLC2A10O95528 541 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 STAMBPO95630 424 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 IGHV4-39P01824 125 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 SERPINA5P05154 406 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF14P17017 642 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-216ENST00000544996 NPR2P20594 1047 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 IFNGR2P38484 337 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 OMPP47874 163 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 ERVK-25P63136 954 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 GALK2Q01415 458 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 HGFACQ04756 655 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 FHL1Q13642 323 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 DAG1Q14118 895 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 TRIM25Q14258 630 aaKnown RBP13.63□□□□□ -0.23
CCDC78-216ENST00000544996 SEC23BQ15437 767 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 IQCCQ4KMZ1 466 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 TRPM8Q7Z2W7 1104 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 ZDHHC21Q8IVQ6 265 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF519Q8TB69 540 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 NSMAFQ92636 917 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 NMD3Q96D46 503 aaKnown RBP13.63□□□□□ -0.23
CCDC78-216ENST00000544996 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 C1orf21Q9H246 121 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF442Q9H7R0 627 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 SIAEQ9HAT2 523 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 NOX3Q9HBY0 568 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 GDF2Q9UK05 429 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-216ENST00000544996 FBXO9Q9UK97 447 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-216ENST00000544996 SIGLEC7Q9Y286 467 aa13.63□□□□□ -0.23
CCDC78-216ENST00000544996 UNC119BA6NIH7 251 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 B9A039 149 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 NDUFS7O75251 213 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 KRT36O76013 467 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 PTHP01270 115 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 PATE4P0C8F1 98 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 LIMS1P48059 325 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 NUDT6P53370 316 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 MRPS34P82930 218 aaKnown RBP13.62□□□□□ -0.23
CCDC78-216ENST00000544996 PLP2Q04941 152 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 FMODQ06828 376 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 RAB39AQ14964 217 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 ADIPOQQ15848 244 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 SWI5Q1ZZU3 235 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 SLC25A47Q6Q0C1 308 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 LRRC18Q8N456 261 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 RSRC1Q96IZ7 334 aaKnown RBP13.62□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF75AQ96N20 296 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 C1orf198Q9H425 327 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 ADAM18Q9Y3Q7 739 aa13.62□□□□□ -0.23
CCDC78-216ENST00000544996 MAP1AP78559 2803 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-216ENST00000544996 IQCMA0A1B0GVH7 501 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 AHCYL1O43865 530 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 SSX4O60224 188 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 OR10H3O60404 316 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 PTP4A3O75365 173 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF35P13682 527 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 ATP6V1B2P21281 511 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 NR4A1P22736 598 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 RRM2P31350 389 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 THBS4P35443 961 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 SNTB2Q13425 540 aaKnown RBP13.61□□□□□ -0.23
CCDC78-216ENST00000544996 EFNB3Q15768 340 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 SGCAQ16586 387 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 MST1LQ2TV78 715 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 GPR139Q6DWJ6 353 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 LCN8Q6JVE9 175 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 KRT80Q6KB66 452 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 FGFBP3Q8TAT2 258 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 HTRA1Q92743 480 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 COX4I2Q96KJ9 171 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 LRGUKQ96M69 825 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF570Q96NI8 536 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 FUZQ9BT04 418 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 LRMDAQ9H2I8 198 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms