RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 IFNGR2P38484 337 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 GIPRP48546 466 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 EVX1P49640 407 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 PPOXP50336 477 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 EFNA4P52798 201 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 CTXN1P60606 82 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 MRPS34P82930 218 aaKnown RBP10.24□□□□□ -0.77
HDAC4-216ENST00000544989 PLP2Q04941 152 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 CD47Q08722 323 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 TNK1Q13470 666 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 LAPTM4AQ15012 233 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 SWI5Q1ZZU3 235 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 ZBED5Q49AG3 693 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 SLC16A14Q7RTX9 510 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 DEFB107AQ8IZN7 70 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 MOSPD2Q8NHP6 518 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 SLC7A13Q8TCU3 470 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 FBXO17Q96EF6 278 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 NSL1Q96IY1 281 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 C7orf34Q96L11 122 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF347Q96SE7 839 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 PLK3Q9H4B4 646 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 SIAEQ9HAT2 523 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 CMAHPQ9Y471 501 aa10.24□□□□□ -0.77
HDAC4-216ENST00000544989 IQCMA0A1B0GVH7 501 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 XKRYO14609 159 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 ARPC2O15144 300 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 F12P00748 615 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-216ENST00000544989 CD14P08571 375 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 CELA3BP08861 270 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 SLC25A16P16260 332 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 MAKP20794 623 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 CALB2P22676 271 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 RPL4P36578 427 aaKnown RBP10.23□□□□□ -0.77
HDAC4-216ENST00000544989 ACVR1BP36896 505 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 PCBD1P61457 104 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 PIGFQ07326 219 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 TOP3AQ13472 1001 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-216ENST00000544989 ADIPOQQ15848 244 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 FGD3Q5JSP0 725 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 UNQ6126/PRO20091Q6UXV3 157 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 DNM1P46Q6ZS02 220 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 WDFY1Q8IWB7 410 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 SKA3Q8IX90 412 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 RNF148Q8N7C7 305 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 SYT14Q8NB59 555 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 OR4K5Q8NGD3 323 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 OR51A7Q8NH64 312 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 DHRS1Q96LJ7 313 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 KCNK17Q96T54 332 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 WACQ9BTA9 647 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 REG4Q9BYZ8 158 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 RAB1BQ9H0U4 201 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 RNF121Q9H920 327 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 NOX3Q9HBY0 568 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF224Q9NZL3 707 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 GRHPRQ9UBQ7 328 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 SLC7A8Q9UHI5 535 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 GDF2Q9UK05 429 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF346Q9UL40 294 aaKnown RBP10.23□□□□□ -0.77
HDAC4-216ENST00000544989 AURKCQ9UQB9 309 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 RTTNQ86VV8 2226 aa10.23□□□□□ -0.77
HDAC4-216ENST00000544989 FBN1P35555 2871 aaKnown RBP10.22□□□□□ -0.77
HDAC4-216ENST00000544989 HIVEP2P31629 2446 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 TRAV27A0A087WT01 109 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF503-AS2A6NEH8 195 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 B2RBV5 119 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 NDUFS8O00217 210 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 SMAD7O15105 426 aaKnown RBP10.22□□□□□ -0.77
HDAC4-216ENST00000544989 SSX4O60224 188 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 KRT36O76013 467 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 NDUFB2O95178 105 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 STAMBPO95630 424 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 FABP3P05413 133 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF35P13682 527 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 GLRXP35754 106 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 SELENOVP59797 346 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 VLDLRP98155 873 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 HSF2Q03933 536 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 HGFACQ04756 655 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 RUNX1T1Q06455 604 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 SNTB2Q13425 540 aaKnown RBP10.22□□□□□ -0.77
HDAC4-216ENST00000544989 TBC1D28Q2M2D7 210 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 MST1LQ2TV78 715 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 GPR139Q6DWJ6 353 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 PODNL1Q6PEZ8 512 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 VHLLQ6RSH7 139 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 TBPL2Q6SJ96 375 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 C1orf174Q8IYL3 243 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 LINC00471Q8N535 108 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 FITM2Q8N6M3 262 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 ARIH2OSQ8N7S6 290 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 LRRC75AQ8NAA5 344 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 RBM15BQ8NDT2 890 aaKnown RBP10.22□□□□□ -0.77
HDAC4-216ENST00000544989 OR10H5Q8NGA6 315 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 OR13C2Q8NGS9 318 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF519Q8TB69 540 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 FAM168AQ92567 244 aa10.22□□□□□ -0.77
HDAC4-216ENST00000544989 HDAC2Q92769 488 aaKnown RBP10.22□□□□□ -0.77
HDAC4-216ENST00000544989 ZNF75AQ96N20 296 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms