RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 APOBEC1P41238 236 aaKnown RBP11.24□□□□□ -0.61
PAAF1-215ENST00000544909 DAP3P51398 398 aaKnown RBP11.24□□□□□ -0.61
PAAF1-215ENST00000544909 RIDAP52758 137 aaKnown RBP11.24□□□□□ -0.61
PAAF1-215ENST00000544909 SQSTM1Q13501 440 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 WDR38Q5JTN6 314 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 C1QTNF12Q5T7M4 302 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 ARHGAP40Q5TG30 622 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 GLT8D1Q68CQ7 371 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 PRSS45Q7RTY3 260 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 PM20D2Q8IYS1 436 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 PRSS35Q8N3Z0 413 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 NKAIN3Q8N8D7 197 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 OR6N1Q8NGY5 312 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 OR8K3Q8NH51 312 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 OR1L3Q8NH93 324 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 RNF138Q8WVD3 245 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-215ENST00000544909 ZNF768Q9H5H4 540 aaKnown RBP11.24□□□□□ -0.61
PAAF1-215ENST00000544909 LMAN1LQ9HAT1 526 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 NOX3Q9HBY0 568 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 SLC23A1Q9UHI7 598 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 TMED7Q9Y3B3 224 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 EML5Q05BV3 1969 aa11.24□□□□□ -0.61
PAAF1-215ENST00000544909 TDRD6O60522 2096 aaKnown RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 SLC22A23A1A5C7 686 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 A6NL46 340 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 FTCDNL1E5RQL4 147 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 AKR7A2O43488 359 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 GMDSO60547 372 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 KIR3DL2P43630 455 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 OR1D4P47884 311 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 OR3A3P47888 321 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 NR0B1P51843 470 aaKnown RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 GPR85P60893 370 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 SNTA1Q13424 505 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MPPED2Q15777 294 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RAB11BQ15907 218 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MEP1BQ16820 701 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RHBDD2Q6NTF9 364 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 FAM198BQ6UWH4 519 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MFSD8Q8NHS3 518 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 THEM6Q8WUY1 208 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 DNASE2BQ8WZ79 361 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 C8orf44Q96CB5 159 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 VN1R1Q9GZP7 353 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 CCDC86Q9H6F5 360 aaKnown RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 HEXA-AS1Q9H8Q6 139 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 KLK11Q9UBX7 282 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 TRAV8-7A0A075B6U6 113 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 UBE2QL1A1L167 161 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ANKUB1A6NFN9 424 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 FAM171A2A8MVW0 826 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MBTPS2O43462 519 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 CTAG2O75638 210 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 SCGNO76038 276 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 PNLIPP16233 465 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ACHEP22303 614 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MSX1P28360 303 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 VEGFCP49767 419 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ZP1P60852 638 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 INSM1Q01101 510 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 C17orf67Q0P5P2 114 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 DEFB133Q30KQ1 61 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 CLLU1Q5K131 121 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ZNF704Q6ZNC4 412 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 UTS2BQ765I0 119 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RHOUQ7L0Q8 258 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MARCH3Q86UD3 253 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 CATSPERDQ86XM0 798 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MEIOBQ8N635 442 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 DTX3Q8N9I9 347 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ADPRHL1Q8NDY3 354 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 OR8H1Q8NGG4 311 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 OR6M1Q8NGM8 313 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 OR2T35Q8NGX2 323 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 OR52N5Q8NH56 324 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RLN3Q8WXF3 142 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 MYOZ1Q9NP98 299 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-215ENST00000544909 KCNG2Q9UJ96 466 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 SPTBP11277 2137 aa11.23□□□□□ -0.61
PAAF1-215ENST00000544909 RANBP2P49792 3224 aaKnown RBP11.22□□□□□ -0.61
PAAF1-215ENST00000544909 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
PAAF1-215ENST00000544909 TVP23AA6NH52 213 aa11.22□□□□□ -0.61
PAAF1-215ENST00000544909 PSMD9O00233 223 aa11.22□□□□□ -0.61
PAAF1-215ENST00000544909 NUDT14O95848 222 aa11.22□□□□□ -0.61
PAAF1-215ENST00000544909 ONECUT2O95948 504 aa11.22□□□□□ -0.61
PAAF1-215ENST00000544909 IGFBP3P17936 291 aaPredicted RBP11.22□□□□□ -0.61
PAAF1-215ENST00000544909 PTGS2P35354 604 aa11.22□□□□□ -0.61
PAAF1-215ENST00000544909 SOX2P48431 317 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms