RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 GYS2P54840 703 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 KLF3P57682 345 aaPredicted RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 PCBP3P57721 371 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 IL13RA1P78552 427 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 CDK6Q00534 326 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 TEKQ02763 1124 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 CAMK2DQ13557 499 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 SCARB2Q14108 478 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 KLF17Q5JT82 389 aaPredicted RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 REEP3Q6NUK4 255 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 TMEM154Q6P9G4 183 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 USP51Q70EK9 711 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 PIWIL3Q7Z3Z3 882 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 SNX32Q86XE0 403 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 LSMEM1Q8N8F7 131 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 OR6S1Q8NH40 331 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 SYNPRQ8TBG9 265 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 GTF3AQ92664 365 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 ULBP2Q9BZM5 246 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 KAT8Q9H7Z6 458 aaKnown RBP10.88□□□□□ -0.67
USP28-212ENST00000544750 B3GAT2Q9NPZ5 323 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 ZNF69Q9UC07 566 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 IFT52Q9Y366 437 aa10.88□□□□□ -0.67
USP28-212ENST00000544750 A0A1B0GWA3 101 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 SLC22A23A1A5C7 686 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 EVPLLA8MZ36 301 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 CLDN34H7C241 214 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 TPST1O60507 370 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 SNAP29O95721 258 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 FAM157BP0CG42 384 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 DRD4P21917 467 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 RAD52P43351 418 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 LCN2P80188 198 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 COQ5Q5HYK3 327 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 NANOGP8Q6NSW7 305 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 BCL6BQ8N143 479 aaPredicted RBP10.87□□□□□ -0.67
USP28-212ENST00000544750 SCAIQ8N9R8 606 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 ZNF519Q8TB69 540 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 TAF15Q92804 592 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP28-212ENST00000544750 NANOGQ9H9S0 305 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 MRGBPQ9NV56 204 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 SLCO1C1Q9NYB5 712 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 PLEK2Q9NYT0 353 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 GPR160Q9UJ42 338 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 NUP50Q9UKX7 468 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 ZNF232Q9UNY5 417 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
USP28-212ENST00000544750 CAPN7Q9Y6W3 813 aa10.87□□□□□ -0.67
USP28-212ENST00000544750 C5orf58C9J3I9 102 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 DYNC1I1O14576 645 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 MRASO14807 208 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SLC22A2O15244 555 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 UBOX5O94941 541 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 IGHV3-13P01766 116 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 CCL2P13500 99 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 MAKP20794 623 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SLC6A2P23975 617 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 AQP1P29972 269 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 PRKAR1BP31321 381 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 LSP1P33241 339 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 CRYBA2P53672 197 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SELENOVP59797 346 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 PUDPQ08623 228 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 HFEQ30201 348 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 RABL3Q5HYI8 236 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 TMEM255AQ5JRV8 349 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 DHRS4L2Q6PKH6 230 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 RBMS3Q6XE24 437 aaKnown RBP10.86□□□□□ -0.67
USP28-212ENST00000544750 PXKQ7Z7A4 578 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 CALHM3Q86XJ0 350 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 TREML1Q86YW5 311 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SLC22A24Q8N4F4 322 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 POU5F2Q8N7G0 328 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 HIPK4Q8NE63 616 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SLC30A7Q8NEW0 376 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 OR6N1Q8NGY5 312 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 OR10A6Q8NH74 314 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SNX33Q8WV41 574 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 RAB1CQ92928 201 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 TMEM54Q969K7 222 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 MOGAT1Q96PD6 335 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 GPA33Q99795 319 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 ELAC2Q9BQ52 826 aaKnown RBP10.86□□□□□ -0.67
USP28-212ENST00000544750 WFDC6Q9BQY6 131 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 ARMC7Q9H6L4 198 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 SAP30LQ9HAJ7 183 aa10.86□□□□□ -0.67
USP28-212ENST00000544750 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
USP28-212ENST00000544750 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 TRAPPC2LH3BP13 241 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 PLPP3O14495 311 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 KRT34O76011 436 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 MFN2O95140 757 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 NQO1P15559 274 aaKnown RBP10.85□□□□□ -0.67
USP28-212ENST00000544750 MDKP21741 143 aaPredicted RBP10.85□□□□□ -0.67
USP28-212ENST00000544750 GCH1P30793 250 aa10.85□□□□□ -0.67
USP28-212ENST00000544750 PCGF2P35227 344 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms