RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FAM76AQ8TAV0 307 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 ADAMTS15Q8TE58 950 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 CCL17Q92583 94 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 PHF21BQ96EK2 531 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 GIMAP5Q96F15 307 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 THOC1Q96FV9 657 aaKnown RBP3.42□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF764Q96H86 408 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF385AQ96PM9 386 aaKnown RBP3.42□□□□□ -1.86
SNHG1-220ENST00000544550 B9D2Q9BPU9 175 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 DESI2Q9BSY9 194 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM120AQ9BXJ8 343 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 EBPLQ9BY08 206 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 ACPTQ9BZG2 426 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 EGLN1Q9GZT9 426 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 MYLK2Q9H1R3 596 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 SLC25A32Q9H2D1 315 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 CENPHQ9H3R5 247 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 C16orf95Q9H693 158 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 MARCH7Q9H992 704 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 CTPS2Q9NRF8 586 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 TNFRSF19Q9NS68 423 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 SIRT3Q9NTG7 399 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-220ENST00000544550 TBCCD1Q9NVR7 557 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 MYEF2Q9P2K5 600 aaKnown RBP3.42□□□□□ -1.86
SNHG1-220ENST00000544550 GRHPRQ9UBQ7 328 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 DNAJB11Q9UBS4 358 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 NKX1-2Q9UD57 310 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-220ENST00000544550 SLC35A3Q9Y2D2 325 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 STK38LQ9Y2H1 464 aa3.42□□□□□ -1.86
SNHG1-220ENST00000544550 EPPK1P58107 5090 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 IGLV3-9A0A075B6K5 115 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 IGHV3OR16-10A0A075B7F0 116 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 BTBD17A6NE02 478 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF99A8MXY4 864 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 E7ESA3 106 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 E9PQ18 207 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 NPIPB9F8W1W9 429 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 TRAPPC2LH3BP13 241 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 PGRMC1O00264 195 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 MANBAO00462 879 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 RAD51CO43502 376 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 AKAP8O43823 692 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 GPR137BO60478 399 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ENTPD5O75356 428 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 UPK3AO75631 287 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 TSPAN9O75954 239 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 RSL1D1O76021 490 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 TGDSO95455 350 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 HMGN2P05204 90 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 MELTFP08582 738 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 RPS17P08708 135 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 GSTA2P09210 222 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 UBTFL6P0CB48 400 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 OR12D1P0DN82 309 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 CD79AP11912 226 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 UQCRBP14927 111 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF250P15622 560 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF14P17017 642 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 DRD4P21917 467 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 UQCRC2P22695 453 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 EPHA3P29320 983 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 HMOX2P30519 316 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 PRKAR1BP31321 381 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 LIPAP38571 399 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 POLR2HP52434 150 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ARF1P84077 181 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 DGCR2P98153 550 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 FOXE3Q13461 319 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 NAB1Q13506 487 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 CAMK2DQ13557 499 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 PDE7AQ13946 482 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 LASP1Q14847 261 aaKnown RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF141Q15928 474 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 IMPG1Q17R60 797 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 NDUFAF6Q330K2 333 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ALKBH6Q3KRA9 238 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 PDZK1Q5T2W1 519 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 TMEM225Q6GV28 225 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 DHRS7BQ6IAN0 325 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 FRRS1Q6ZNA5 592 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 Q6ZSV7 163 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 CREB3L2Q70SY1 520 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF771Q7L3S4 317 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZNF551Q7Z340 670 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 LRP11Q86VZ4 500 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 SNX32Q86XE0 403 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 CTAGE3PQ8IX95 158 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 IZUMO1Q8IYV9 350 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 CENPLQ8N0S6 344 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 MUC20Q8N307 709 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-220ENST00000544550 GPR137CQ8N3F9 429 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ZIC4Q8N9L1 334 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 SPERTQ8NA61 448 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 SYNPRQ8TBG9 265 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 METTL6Q8TCB7 284 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 PYROXD1Q8WU10 500 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 ASB10Q8WXI3 467 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 C11orf40Q8WZ69 217 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 CDS1Q92903 461 aa3.41□□□□□ -1.86
SNHG1-220ENST00000544550 C16orf58Q96GQ5 468 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms