RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ATP6V1E1P36543 226 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 CDKN2AP42771 156 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 CSNK1A1P48729 337 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 CASP6P55212 293 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 RPS7P62081 194 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 GLO1Q04760 184 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 RAB40BQ12829 278 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 APOFQ13790 326 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 MELKQ14680 651 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 STK11Q15831 433 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 ACSF3Q4G176 576 aaPredicted RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 KLHL12Q53G59 568 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 AAED1Q7RTV5 226 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 ABHD12BQ7Z5M8 362 aaPredicted RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 ZBTB46Q86UZ6 589 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 FJX1Q86VR8 437 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 POMGNT2Q8NAT1 580 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 CYB561A3Q8NBI2 242 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 PROKR2Q8NFJ6 384 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 OR6N1Q8NGY5 312 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 APH1BQ8WW43 257 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 UBE2FQ969M7 185 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 MRPL48Q96GC5 212 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 TXNDC15Q96J42 360 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 OR2M2Q96R28 347 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 TRIB1Q96RU8 372 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 DDOQ99489 341 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 MRPL13Q9BYD1 178 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 RACGAP1Q9H0H5 632 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SYT4Q9H2B2 425 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 VCX3AQ9NNX9 186 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 RPRD1BQ9NQG5 326 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 MRPS18AQ9NVS2 196 aaKnown RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 EMC9Q9Y3B6 208 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SNX5Q9Y5X3 404 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
YBX3-215ENST00000544504 MED12Q93074 2177 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 MED13LQ71F56 2210 aa8.44□□□□□ -1.06
YBX3-215ENST00000544504 A0A087WXM4 84 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 OR6C68A6NDL8 312 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 FAM183AA6NL82 134 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 RAMP1O60894 148 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 SS18L1O75177 396 aaPredicted RBP8.43□□□□□ -1.06
YBX3-215ENST00000544504 ZNF432O94892 652 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 LYNP07948 512 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 DBTP11182 482 aaKnown RBP8.43□□□□□ -1.06
YBX3-215ENST00000544504 SLC2A5P22732 501 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 DCKP27707 260 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 ZNF84P51523 738 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 ZNF91Q05481 1191 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 CAMK2DQ13557 499 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 C3AR1Q16581 482 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 C1orf185Q5T7R7 199 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 RIPPLY2Q5TAB7 128 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 ZNF585AQ6P3V2 769 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 CDH24Q86UP0 819 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 CD163Q86VB7 1156 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 TMEM123Q8N131 208 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 GPR137CQ8N3F9 429 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 STX19Q8N4C7 294 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 SVOPQ8N4V2 548 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 ZIC4Q8N9L1 334 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 OR5M9Q8NGP3 310 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 OR9Q1Q8NGQ5 310 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 ABHD3Q8WU67 409 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 PTP4A1Q93096 173 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 APH1AQ96BI3 265 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 RNFT2Q96EX2 444 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 MNTQ99583 582 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 TEAD3Q99594 435 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 COPS4Q9BT78 406 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 EMC6Q9BV81 110 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 LINC00470Q9BZP3 86 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 OR51V1Q9H2C8 321 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 SLCO5A1Q9H2Y9 848 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 DUSP21Q9H596 190 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 INPP5EQ9NRR6 644 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
YBX3-215ENST00000544504 GLTPQ9NZD2 209 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 TNFRSF10DQ9UBN6 386 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 PSORS1C1Q9UIG5 152 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 SCOCQ9UIL1 159 aa8.43□□□□□ -1.06
YBX3-215ENST00000544504 MBD3L4A6NDZ8 208 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 MBD3L3A6NE82 208 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 TRIM64A6NGJ6 449 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 MBD3L5A6NJ08 208 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 PTGES3LE9PB15 166 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 RGS10O43665 173 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 XPNPEP2O43895 674 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SLC16A7O60669 478 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SLC19A2O60779 497 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TMCC2O75069 709 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 KRT33AO76009 404 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 AQP8O94778 261 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 CNOT4O95628 575 aaKnown RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 RAB36O95755 333 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TGM6O95932 706 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 IL2RAP01589 272 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms