RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 ZNF628Q5EBL2 1059 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 RBMS3Q6XE24 437 aaKnown RBP12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 HSD17B11Q8NBQ5 300 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 TTC9Q92623 222 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 ZNF681Q96N22 645 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 PLEKHA3Q9HB20 300 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 PRAMEF27A3QJZ7 478 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 P2RY10O00398 339 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 BRINP1O60477 761 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 IRS1P35568 1242 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 TAGLN2P37802 199 aaKnown RBP12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 FASLGP48023 281 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 CDK5Q00535 292 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 NFATC4Q14934 902 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 ZNF74Q16587 644 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 PRAMEF9Q5VWM5 478 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 FAAP20Q6NZ36 180 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 A4GNTQ9UNA3 340 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 PCYT1BQ9Y5K3 369 aaPredicted RBP12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 BCL2L11O43521 198 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 CBR1P16152 277 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 CD80P33681 288 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 NPY4RP50391 375 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 LINC00303Q3SY05 128 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 SLC36A2Q495M3 483 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 GLYR1Q49A26 553 aaPredicted RBP12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 FAM57BQ71RH2 274 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 LYRM4Q9HD34 91 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
MAP3K4-215ENST00000544041 SERPINF1P36955 418 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 P2RX1P51575 399 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 RCBTB1Q8NDN9 531 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 CDCP1Q9H5V8 836 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 IL20Q9NYY1 176 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 CGGBP1Q9UFW8 167 aaPredicted RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 COL18A1P39060 1754 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 CNTRLQ7Z7A1 2325 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 A0A087WZY1 265 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 SERTM1A2A2V5 107 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 ZNF728P0DKX0 622 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 OR1D4P47884 311 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 STAC2Q6ZMT1 411 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 POC1BQ8TC44 478 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 CPNE4Q96A23 557 aaPredicted RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 FGGYQ96C11 551 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 NXF5Q9H1B4 397 aaKnown RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 DLL4Q9NR61 685 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 HRO43593 1189 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 FCMRO60667 390 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 RPS18P62269 152 aaKnown RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 FAM27D1Q5T7N8 215 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 Q6ZSR6 202 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 TMEFF1Q8IYR6 380 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 MR1Q95460 341 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 WDR89Q96FK6 387 aaPredicted RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 HDAC8Q9BY41 377 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 PLA2G12AQ9BZM1 189 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 RNF186Q9NXI6 227 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 MT-ATP6P00846 226 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 TBPP20226 339 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 MANEAQ5SRI9 462 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 TMPPEQ6ZT21 453 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 ZNF561Q8N587 486 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 ZC3HAV1LQ96H79 300 aaKnown RBP12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 V9GYH0 126 aa12.56□□□□□ -0.4
MAP3K4-215ENST00000544041 LOC102725191A0A1B0GVB3 256 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 DDAH2O95865 285 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 CD3DP04234 171 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 LIMS3P0CW19 117 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 LIMS4P0CW20 117 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 EMC4Q5J8M3 183 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 USP53Q70EK8 1073 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 CCDC71Q8IV32 467 aaPredicted RBP12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 MYEOVQ96EZ4 313 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 SLC46A1Q96NT5 459 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 SAMD10Q9BYL1 202 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 GDE1Q9NZC3 331 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 KLK11Q9UBX7 282 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 B3GALT5Q9Y2C3 310 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 RFPL4AA6NLU0 287 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 RFPL4AL1F8VTS6 287 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 PRAMEF26H0Y7S4 382 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 OR14L1PQ8NHC6 308 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 LIN37Q96GY3 246 aaPredicted RBP12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 B4GALT7Q9UBV7 327 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 HTD2P86397 168 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 IFITM3Q01628 133 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
MAP3K4-215ENST00000544041 CD300LDQ6UXZ3 194 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms