RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GUCA1AP43080 201 aaPredicted RBP12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 KIR2DL3P43628 341 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CENPAP49450 140 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HIKESHIQ53FT3 197 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C10orf128Q5T292 105 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ANKRD16Q6P6B7 361 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DNM1P34Q6PK57 102 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC25A47Q6Q0C1 308 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 KLHL24Q6TFL4 600 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF813Q6ZN06 617 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CYB561A3Q8NBI2 242 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC37A3Q8NCC5 494 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OTULINQ96BN8 352 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MUS81Q96NY9 551 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 WFIKKN1Q96NZ8 548 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC38A2Q96QD8 506 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 USB1Q9BQ65 265 aaKnown RBP12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 GABARAPL3Q9BY60 117 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PRRG3Q9BZD7 231 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NUAK2Q9H093 628 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR10A4Q9H209 315 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FN3KQ9H479 309 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SEC61A2Q9H9S3 476 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SRA1Q9HD15 236 aaKnown RBP12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C8orf4Q9NR00 106 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CMC2Q9NRP2 79 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TVP23BQ9NYZ1 205 aa12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PLEKHB1Q9UF11 243 aaPredicted RBP12.71□□□□□ -0.38
TNFRSF1A-216ENST00000543995 A0A1W2PR80 420 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SH3D21A4FU49 640 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR6C68A6NDL8 312 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CASQ2O14958 399 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CTLA4P16410 223 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CRABP1P29762 137 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CDAP32320 146 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 POLR2IP36954 125 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CAPZA2P47755 286 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF133P52736 654 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 RIPK1Q13546 671 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CRMP1Q14194 572 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ETFDHQ16134 617 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TBRG1Q3YBR2 411 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TIMM23BQ5SRD1 257 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SP5Q6BEB4 398 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 P2RY8Q86VZ1 359 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 C17orf78Q8N4C9 275 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NPEPL1Q8NDH3 523 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR52N5Q8NH56 324 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 BCL2L2Q92843 193 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 MUCL1Q96DR8 90 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TSSK2Q96PF2 358 aa12.7□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 USP9XQ93008 2570 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR5H1A6NKK0 313 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZAR1LA6NP61 321 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SURF4O15260 269 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 KHDRBS3O75525 346 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FARS2O95363 451 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ATP6V1G2O95670 118 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SNAP29O95721 258 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 IGFBP2P18065 325 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PAICSP22234 425 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 UBE2NP61088 152 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TAB1Q15750 504 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 ZNF362Q5T0B9 420 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLX4IPQ5VYV7 408 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR9Q1Q8NGQ5 310 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HSD17B8Q92506 261 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HTRA1Q92743 480 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FOXN4Q96NZ1 517 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 VCXQ9H320 206 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TOR3AQ9H497 397 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC24A3Q9HC58 644 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SMPD3Q9NY59 655 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FLNCQ14315 2725 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 DOPEY2Q9Y3R5 2298 aa12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 HELZ2Q9BYK8 2649 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-216ENST00000543995 TENM4Q6N022 2769 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 FAM183AA6NL82 134 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 CASKO14936 926 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 WNT11O96014 354 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR8G3PP0DMU2 310 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 COX6B1P14854 86 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 NPR2P20594 1047 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 COL8A1P27658 744 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PPA1Q15181 289 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SGCAQ16586 387 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 WFDC8Q8IUA0 241 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 OR6V1Q8N148 313 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 LRRC18Q8N456 261 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 SLC22A24Q8N4F4 322 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PACRGLQ8N7B6 248 aa12.68□□□□□ -0.38
TNFRSF1A-216ENST00000543995 PROKR2Q8NFJ6 384 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms