RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 C10orf128Q5T292 105 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 SLC27A4Q6P1M0 643 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 ANKRD16Q6P6B7 361 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 SLC25A47Q6Q0C1 308 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 SDR9C7Q8NEX9 313 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 OR52E2Q8NGJ4 325 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
SP140-213ENST00000543928 SNX18Q96RF0 628 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 FOXB1Q99853 325 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 USB1Q9BQ65 265 aaKnown RBP11.95□□□□□ -0.5
SP140-213ENST00000543928 NELFAQ9H3P2 528 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 DCLRE1BQ9H816 532 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 USE1Q9NZ43 259 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 ENOPH1Q9UHY7 261 aa11.95□□□□□ -0.5
SP140-213ENST00000543928 A0A1W2PR80 420 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 OR5H1A6NKK0 313 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 RENP00797 406 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 THBDP07204 575 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 CTLA4P16410 223 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 HOXC12P31275 282 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 GRK5P34947 590 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 CDK5Q00535 292 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 PTGES3Q15185 160 aaKnown RBP11.94□□□□□ -0.5
SP140-213ENST00000543928 TRIP10Q15642 601 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 TAB1Q15750 504 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 TMEM236Q5W0B7 351 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 ALKBH2Q6NS38 261 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 ACSM5Q6NUN0 579 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 ZNF813Q6ZN06 617 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 ZBTB49Q6ZSB9 765 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 ZNF627Q7L945 461 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 P2RY8Q86VZ1 359 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 WFDC8Q8IUA0 241 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 OR52N5Q8NH56 324 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 HSD17B8Q92506 261 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 HTRA1Q92743 480 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 BOD1Q96IK1 185 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 DACH2Q96NX9 599 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 SLC29A1Q99808 456 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 RERGLQ9H628 205 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 SLC25A19Q9HC21 320 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 SLC24A3Q9HC58 644 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 TMEM38BQ9NVV0 291 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 KLHL21Q9UJP4 597 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 UGT2A1Q9Y4X1 527 aa11.94□□□□□ -0.5
SP140-213ENST00000543928 HECTD1Q9ULT8 2610 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 OR6C68A6NDL8 312 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 RIIAD1A6NNX1 92 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 SLC16A7O60669 478 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 IFNGP01579 166 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 EPXP11678 715 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 EPHA2P29317 976 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 CDAP32320 146 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
SP140-213ENST00000543928 NPRL3Q12980 569 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 PPA1Q15181 289 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 ETFDHQ16134 617 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 ZNF362Q5T0B9 420 aaPredicted RBP11.93□□□□□ -0.5
SP140-213ENST00000543928 LPCAT4Q643R3 524 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 KLHL24Q6TFL4 600 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 WDR31Q8NA23 367 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 CYB561A3Q8NBI2 242 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 SLC37A3Q8NCC5 494 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 NPEPL1Q8NDH3 523 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 MUCL1Q96DR8 90 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 TSSK2Q96PF2 358 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 TEX12Q9BXU0 123 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 GABARAPL3Q9BY60 117 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 NUAK2Q9H093 628 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 FN3KQ9H479 309 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 RIBC2Q9H4K1 309 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 RPRD1BQ9NQG5 326 aaKnown RBP11.93□□□□□ -0.5
SP140-213ENST00000543928 CMC2Q9NRP2 79 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 NKX1-2Q9UD57 310 aaPredicted RBP11.93□□□□□ -0.5
SP140-213ENST00000543928 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 ORC6Q9Y5N6 252 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
SP140-213ENST00000543928 A0A1W2PPL8 197 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 DCTN6O00399 190 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 CASKO14936 926 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 KHDRBS3O75525 346 aaKnown RBP11.92□□□□□ -0.5
SP140-213ENST00000543928 HMGN1P05114 100 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 ZNF3P17036 446 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 PEX2P28328 305 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 CRABP1P29762 137 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 POLR2IP36954 125 aaKnown RBP11.92□□□□□ -0.5
SP140-213ENST00000543928 CAPZA2P47755 286 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 RAD23AP54725 363 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
SP140-213ENST00000543928 TUBA1BP68363 451 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 TUBA4AP68366 448 aa11.92□□□□□ -0.5
SP140-213ENST00000543928 MRPS34P82930 218 aaKnown RBP11.92□□□□□ -0.5
SP140-213ENST00000543928 CRMP1Q14194 572 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms