RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SMSP52788 366 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GALK2Q01415 458 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SRYQ05066 204 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 BNIP1Q12981 228 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 TOMM34Q15785 309 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PLPPR5Q32ZL2 321 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SPATS1Q496A3 300 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GXYLT1Q4G148 440 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 LRRC23Q53EV4 343 aaPredicted RBP4.56□□□□□ -1.68
CLIP1-217ENST00000543205 WLSQ5T9L3 541 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ENPP6Q6UWR7 440 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RNF144BQ7Z419 303 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 GRAMD2AQ8IUY3 354 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 MCEMP1Q8IX19 187 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 CADM2Q8N3J6 435 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 BEND2Q8NDZ0 799 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 FAM71CQ8NEG0 241 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 FAM57AQ8TBR7 257 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 LZICQ8WZA0 190 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ST8SIA1Q92185 356 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PROX1Q92786 737 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 NSMCE2Q96MF7 247 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RNF145Q96MT1 663 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 TUBA1CQ9BQE3 449 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 UGT2B28Q9BY64 529 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 FAM118AQ9NWS6 357 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 ETAA1Q9NY74 926 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 SPRR3Q9UBC9 169 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 RPS6KB2Q9UBS0 482 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 PACSIN3Q9UKS6 424 aa4.56□□□□□ -1.68
CLIP1-217ENST00000543205 NINQ8N4C6 2090 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 EML6Q6ZMW3 1958 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TRGV8A0A0C4DH27 118 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 OR2M5A3KFT3 312 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 C5orf52A6NGY3 159 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF716A6NP11 495 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 FAAHO00519 579 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 EBAG9O00559 213 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TPST1O60507 370 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GCM2O75603 506 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 FESP07332 822 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF735P0CB33 412 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 HSD17B1P14061 328 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 NCK1P16333 377 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GGT1P19440 569 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 HTR1EP28566 365 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 KDELR2P33947 212 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 UQCRFS1P47985 274 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 STARP49675 285 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 RASSF2P50749 326 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 RGS8P57771 180 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 B3GALT5-AS1P59052 145 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 NCALDP61601 193 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 HOXC5Q00444 222 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CRYZQ08257 329 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 MERTKQ12866 999 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 FOXF1Q12946 379 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 RCN1Q15293 331 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SF3B4Q15427 424 aaKnown RBP eCLIP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 DUSP7Q16829 419 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 EIF2S3LQ2VIR3 472 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 IQCCQ4KMZ1 466 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 DNAL1Q4LDG9 190 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CYBRD1Q53TN4 286 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SPATA46Q5T0L3 261 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GLYATQ6IB77 296 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF585AQ6P3V2 769 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM88Q6PEY1 159 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 METAP1DQ6UB28 335 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CCDC121Q6ZUS5 278 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CHMP1BQ7LBR1 199 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 RANBP3LQ86VV4 465 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 PM20D2Q8IYS1 436 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 EID3Q8N140 333 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ARHGAP24Q8N264 748 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GTPBP8Q8N3Z3 284 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ATP6V1C2Q8NEY4 427 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 STEAP2Q8NFT2 490 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 OR5M9Q8NGP3 310 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 C2CD4CQ8TF44 421 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SMPDL3BQ92485 455 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SLC35B4Q969S0 331 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TAMM41Q96BW9 452 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TPD52L3Q96J77 140 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TIMP4Q99727 224 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 KLHDC3Q9BQ90 382 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ACER3Q9NUN7 267 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TAS2R1Q9NYW7 299 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CD300AQ9UGN4 299 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 PRPF19Q9UMS4 504 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 A4GNTQ9UNA3 340 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SLC9A8Q9Y2E8 581 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF835Q9Y2P0 537 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 UBE2J1Q9Y385 318 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF337Q9Y3M9 751 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CHST2Q9Y4C5 530 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 AP4B1Q9Y6B7 739 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 A0A1B0GUH1 482 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms