RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TGIF2LYQ8IUE0 185 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 ADGRG5Q8IZF4 528 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 ARIH2OSQ8N7S6 290 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 NSMAFQ92636 917 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 NABP1Q96AH0 204 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 RSRC1Q96IZ7 334 aaKnown RBP8.44□□□□□ -1.06
YBX3-212ENST00000542002 DHRS9Q9BPW9 319 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 TRAF4Q9BUZ4 470 aaPredicted RBP8.44□□□□□ -1.06
YBX3-212ENST00000542002 GSX2Q9BZM3 304 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 MUC13Q9H3R2 512 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 NRIP3Q9NQ35 241 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 TMEM5Q9Y2B1 443 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 LYVE1Q9Y5Y7 322 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 ATP23Q9Y6H3 246 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 CADP27708 2225 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 IGHV2OR16-5A0A0B4J2B6 119 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 SLC22A23A1A5C7 686 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 TNFRSF11BO00300 401 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 ARHGEF9O43307 516 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 OR10H3O60404 316 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 DNAJC8O75937 253 aaPredicted RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 IGFBP1P08833 259 aaPredicted RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 MMP7P09237 267 aaPredicted RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 OR8G3PP0DMU2 310 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 ZNF35P13682 527 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 RPL4P36578 427 aaKnown RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 GSSP48637 474 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 PTDSS1P48651 473 aaKnown RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 ERFP50548 548 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 FABP6P51161 128 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 SMIM11AP58511 58 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 NPRL3Q12980 569 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 RAB39AQ14964 217 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 TAF11Q15544 211 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 MSMPQ1L6U9 139 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 GSG1Q2KHT4 349 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 RFX4Q33E94 735 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 MESTQ5EB52 335 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 MTX3Q5HYI7 312 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 THEM4Q5T1C6 240 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 OTPQ5XKR4 325 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 PTCHD4Q6ZW05 846 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 TMEM179BQ7Z7N9 219 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 CCDC36Q8IYA8 594 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 LRRC75A-AS1Q8N1F1 130 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 CIARTQ8N365 385 aaPredicted RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 LRRC18Q8N456 261 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 PAQR4Q8N4S7 273 aaPredicted RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 OR9Q2Q8NGE9 314 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 TMEM171Q8WVE6 324 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 CANT1Q8WVQ1 401 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 SLCO4A1Q96BD0 722 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 RASD2Q96D21 266 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 FBXO17Q96EF6 278 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 CHID1Q9BWS9 393 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 MAGIXQ9H6Y5 334 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 DLL4Q9NR61 685 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 GDF2Q9UK05 429 aaPredicted RBP8.43□□□□□ -1.06
YBX3-212ENST00000542002 POU2F3Q9UKI9 436 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 POMPQ9Y244 141 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 IER3IP1Q9Y5U9 82 aa8.43□□□□□ -1.06
YBX3-212ENST00000542002 TEX13CA0A0J9YWL9 993 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 TMEM129A0AVI4 362 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 MGRN1O60291 552 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 KRT36O76013 467 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 NDUFB2O95178 105 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 CCL2P13500 99 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 FPR3P25089 353 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 APOBEC3AP31941 199 aaPredicted RBP8.42□□□□□ -1.06
YBX3-212ENST00000542002 THBS4P35443 961 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 MRPS34P82930 218 aaKnown RBP8.42□□□□□ -1.06
YBX3-212ENST00000542002 CD47Q08722 323 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 ADIPOQQ15848 244 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 SGCAQ16586 387 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 SWI5Q1ZZU3 235 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 Q5PR19 223 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 SMARCD3Q6STE5 483 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 UGT2A3Q6UWM9 527 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 DPY19L2P2Q6ZN68 376 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 YTHDF3Q7Z739 585 aaKnown RBP8.42□□□□□ -1.06
YBX3-212ENST00000542002 DEPDC4Q8N2C3 294 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 MUC15Q8N387 334 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 CPEB3Q8NE35 698 aaKnown RBP8.42□□□□□ -1.06
YBX3-212ENST00000542002 SAMD8Q96LT4 415 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 FOXN4Q96NZ1 517 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 TSSK2Q96PF2 358 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 RBP7Q96R05 134 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 GPX7Q96SL4 187 aaPredicted RBP8.42□□□□□ -1.06
YBX3-212ENST00000542002 ALG12Q9BV10 488 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 TRIM15Q9C019 465 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 GRIP2Q9C0E4 1043 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 EGLN3Q9H6Z9 239 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 SIAEQ9HAT2 523 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 SMURF2Q9HAU4 748 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 GRHPRQ9UBQ7 328 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 SLC7A8Q9UHI5 535 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 AURKCQ9UQB9 309 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 U3KQV3 271 aa8.42□□□□□ -1.06
YBX3-212ENST00000542002 TCRBV3S1A0A5B6 114 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms