RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SIAEQ9HAT2 523 aa16.44■□□□□ 0.22
VPS33A-205ENST00000541169 S100A14Q9HCY8 104 aa16.44■□□□□ 0.22
VPS33A-205ENST00000541169 PAPOLBQ9NRJ5 636 aaKnown RBP16.44■□□□□ 0.22
VPS33A-205ENST00000541169 IL20RAQ9UHF4 553 aa16.44■□□□□ 0.22
VPS33A-205ENST00000541169 SOCS2O14508 198 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 UBL3O95164 117 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 IFNGP01579 166 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 SLC36A2Q495M3 483 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 HIKESHIQ53FT3 197 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 SLC27A4Q6P1M0 643 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 AMIGO2Q86SJ2 522 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 SLC22A24Q8N4F4 322 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 OR52N5Q8NH56 324 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 ZNF837Q96EG3 531 aaPredicted RBP16.43■□□□□ 0.22
VPS33A-205ENST00000541169 TSSK6Q9BXA6 273 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 PRRG3Q9BZD7 231 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 REV1Q9UBZ9 1251 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 KLHL21Q9UJP4 597 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 ALPK2Q86TB3 2170 aa16.43■□□□□ 0.22
VPS33A-205ENST00000541169 DEFB108AA8MXU0 73 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 H3BNX3 289 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 HRGP04196 525 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 HMGN1P05114 100 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 CBR1P16152 277 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 PRKACGP22612 351 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 CENPAP49450 140 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 MYBPC1Q00872 1141 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 SLC36A3Q495N2 470 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 CLEC12AQ5QGZ9 265 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 C22orf34Q6ZV56 151 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 WDFY1Q8IWB7 410 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 DEPDC4Q8N2C3 294 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 RASD2Q96D21 266 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 RBM4BQ9BQ04 359 aaKnown RBP16.42■□□□□ 0.22
VPS33A-205ENST00000541169 RBM4Q9BWF3 364 aaKnown RBP16.42■□□□□ 0.22
VPS33A-205ENST00000541169 CLEC4MQ9H2X3 399 aaPredicted RBP16.42■□□□□ 0.22
VPS33A-205ENST00000541169 NELFAQ9H3P2 528 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 KRT84Q9NSB2 600 aa16.42■□□□□ 0.22
VPS33A-205ENST00000541169 CRNNQ9UBG3 495 aaPredicted RBP16.42■□□□□ 0.22
VPS33A-205ENST00000541169 A0A096LPE4 126 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.41■□□□□ 0.22
VPS33A-205ENST00000541169 A0A1W2PPZ6 126 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 RIIAD1A6NNX1 92 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 KHDRBS3O75525 346 aaKnown RBP16.41■□□□□ 0.22
VPS33A-205ENST00000541169 PTHP01270 115 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 CD3EP07766 207 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 B4GALT1P15291 398 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 HIST1H1CP16403 213 aaKnown RBP16.41■□□□□ 0.22
VPS33A-205ENST00000541169 GRK5P34947 590 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 GIPRP48546 466 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 PTDSS1P48651 473 aaKnown RBP16.41■□□□□ 0.22
VPS33A-205ENST00000541169 PCBD1P61457 104 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 GSG1Q2KHT4 349 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 NCMAPQ5T1S8 102 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 FAM27BQ5VT28 67 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 KDM4DQ6B0I6 523 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 FOXL2NBQ6ZUU3 175 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 SYT9Q86SS6 491 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 TMEM200AQ86VY9 491 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 GLB1L2Q8IW92 636 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 PLPPR2Q96GM1 343 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 PLA2G12AQ9BZM1 189 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 SYT4Q9H2B2 425 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 C1orf198Q9H425 327 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 OAZ3Q9UMX2 235 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 FKBP7Q9Y680 259 aa16.41■□□□□ 0.22
VPS33A-205ENST00000541169 SLC2A10O95528 541 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 IGKV3-15P01624 115 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 TP53P04637 393 aaPredicted RBP16.4■□□□□ 0.22
VPS33A-205ENST00000541169 ZNF3P17036 446 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 CDKN2AP42771 156 aaKnown RBP16.4■□□□□ 0.22
VPS33A-205ENST00000541169 CAPZA2P47755 286 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 BLVRAP53004 296 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 GLO1Q04760 184 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 HIST2H2BCQ6DN03 193 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 TMEM53Q6P2H8 277 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 LEG1Q6P5S2 330 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 SEZ6L2Q6UXD5 910 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 HS3ST5Q8IZT8 346 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 OR2T4Q8NH00 348 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 OR4K13Q8NH42 304 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 PIK3IP1Q96FE7 263 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 PKP2Q99959 881 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 C9orf16Q9BUW7 83 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 RACGAP1Q9H0H5 632 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 SEMA6AQ9H2E6 1030 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 CMC2Q9NRP2 79 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 ORC6Q9Y5N6 252 aa16.4■□□□□ 0.22
VPS33A-205ENST00000541169 FLNBO75369 2602 aaKnown RBP16.39■□□□□ 0.21
VPS33A-205ENST00000541169 C12orf71A8MTZ7 269 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 SLC16A7O60669 478 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 SOX14O95416 240 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 RAB36O95755 333 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 IGLV1-44P01699 117 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 MSR1P21757 451 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 PAICSP22234 425 aaKnown RBP16.39■□□□□ 0.21
VPS33A-205ENST00000541169 LAP3P28838 519 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 DAPP51397 102 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 CDK5Q00535 292 aa16.39■□□□□ 0.21
VPS33A-205ENST00000541169 FMODQ06828 376 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms