RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FRYQ5TBA9 3013 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 K7EQS6 105 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 XRCC3O43542 346 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 CSRP1P21291 193 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 TAF13Q15543 124 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF776Q68DI1 518 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 UNQ6126/PRO20091Q6UXV3 157 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 RHOUQ7L0Q8 258 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM122BQ7Z309 247 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 CDH26Q8IXH8 852 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 SAMD14Q8IZD0 417 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR5M9Q8NGP3 310 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM46BQ96A09 425 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 APMAPQ9HDC9 416 aa9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM184BQ9Y519 407 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-207ENST00000540998 NUP210LQ5VU65 1888 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM235A6NFC5 223 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 SERINC4A6NH21 518 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 D6RAR5 112 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPR31O00270 319 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ADH1BP00325 375 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 AMY2AP04746 511 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 RAB40ALP0C0E4 278 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 EPHA4P54764 986 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 SPOCK1Q08629 439 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR7A5Q15622 319 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNHIT3Q15649 155 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 SMAD2Q15796 467 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ALG11Q2TAA5 492 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 STEAP1BQ6NZ63 245 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF546Q86UE3 836 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF227Q86WZ6 799 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 BPIFCQ8NFQ6 507 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 RAB40AQ8WXH6 277 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 AIFM2Q9BRQ8 373 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ELOVL3Q9HB03 270 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 IFT46Q9NQC8 304 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 MED11Q9P086 117 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 PLEKHA6Q9Y2H5 1048 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR6C65A6NJZ3 312 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 SNRPGP15A8MWD9 76 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPR89AB7ZAQ6 455 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 PLRG1O43660 514 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 APODP05090 189 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPR89BP0CG08 455 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 MPGP29372 298 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 RBM34P42696 430 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 GRK6P43250 576 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF74Q16587 644 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 GVQW1Q8N7I0 195 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ACBD4Q8NC06 268 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 STEAP2Q8NFT2 490 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 BAHD1Q8TBE0 780 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM3DQ96BQ1 224 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM231Q9H6L2 316 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 SPACA6W5XKT8 324 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 CABIN1Q9Y6J0 2220 aa9.37□□□□□ -0.91
CDC42SE1-207ENST00000540998 URADA6NGE7 173 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 HPP00738 406 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 IL5P05113 134 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 SPARCP09486 303 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR4E1P0C645 316 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CALCBP10092 127 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 RPS4XP62701 263 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 KIR2DS3Q14952 304 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMPPEQ6ZT21 453 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 MED25Q71SY5 747 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC16A9Q7RTY1 509 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 PRSS58Q8IYP2 241 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 GABRG1Q8N1C3 465 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 EXD3Q8N9H8 876 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC37A2Q8TED4 501 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CASTOR1Q8WTX7 329 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TAAR8Q969N4 342 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZC3H10Q96K80 434 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 LYRM4Q9HD34 91 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TAS2R4Q9NYW5 299 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TAS2R3Q9NYW6 316 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 GRHPRQ9UBQ7 328 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CD14P08571 375 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 AVPR2P30518 371 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 PRSS3P35030 304 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 RPL35P42766 123 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 KIR2DL1P43626 348 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPR143P51810 404 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ATP1B3P54709 279 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 SRSF3P84103 164 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 GLYATL3Q5SZD4 288 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ANKRD16Q6P6B7 361 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 RNF144BQ7Z419 303 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM151BQ8IW70 566 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms