RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	VLDLR	P98155	873 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	GLYAT	Q6IB77	296 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	SLC25A47	Q6Q0C1	308 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	ZNF730	Q6ZMV8	503 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	MBOAT2	Q6ZWT7	520 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.76	□□□□□ -0.53
POLE-215	ENST00000540987	IL17RD	Q8NFM7	739 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	OR51A7	Q8NH64	312 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	SLC7A13	Q8TCU3	470 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	FAM168A	Q92567	244 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	C7orf34	Q96L11	122 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	DOK1	Q99704	481 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	MRPL37	Q9BZE1	423 aa	Known RBP	11.76	□□□□□ -0.53
POLE-215	ENST00000540987	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.76	□□□□□ -0.53
POLE-215	ENST00000540987	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.76	□□□□□ -0.53
POLE-215	ENST00000540987	DCAF13	Q9NV06	445 aa	Known RBP	11.76	□□□□□ -0.53
POLE-215	ENST00000540987	NDUFAF4	Q9P032	175 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	RPS6KA6	Q9UK32	745 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	ZNF346	Q9UL40	294 aa	Known RBP	11.76	□□□□□ -0.53
POLE-215	ENST00000540987	ARL2BP	Q9Y2Y0	163 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987		V9GYQ6	96 aa		11.76	□□□□□ -0.53
POLE-215	ENST00000540987	RTTN	Q86VV8	2226 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	ABCA2	Q9BZC7	2435 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	HTR3E	A5X5Y0	456 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	VWC2L	B2RUY7	222 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	DIRAS1	O95057	198 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	SEMG1	P04279	462 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	SERPINA5	P05154	406 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	MMP7	P09237	267 aa	Predicted RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	CSF3	P09919	207 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	SLC25A16	P16260	332 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	TCN1	P20061	433 aa	Predicted RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	ZNF84	P51523	738 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	CTXN1	P60606	82 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	RPL27	P61353	136 aa	Known RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	CD47	Q08722	323 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	NRN1L	Q496H8	165 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	IQCC	Q4KMZ1	466 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	PODNL1	Q6PEZ8	512 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	SLC16A14	Q7RTX9	510 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	PGAM4	Q8N0Y7	254 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	NSMAF	Q92636	917 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	MRPL24	Q96A35	216 aa	Known RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	DHRS1	Q96LJ7	313 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	TNFRSF13C	Q96RJ3	184 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	VRK1	Q99986	396 aa	Predicted RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	ALG12	Q9BV10	488 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	ANKRD19P	Q9H560	264 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	SMURF2	Q9HAU4	748 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	MYEF2	Q9P2K5	600 aa	Known RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	STX18	Q9P2W9	335 aa	Known RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	CD300A	Q9UGN4	299 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	TAGLN3	Q9UI15	199 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	FBXL3	Q9UKT7	428 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	FKBP7	Q9Y680	259 aa		11.75	□□□□□ -0.53
POLE-215	ENST00000540987	CHD3	Q12873	2000 aa	Known RBP	11.75	□□□□□ -0.53
POLE-215	ENST00000540987	TRBV4-1	A0A0J9YWV2	114 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987		H7C1C5	153 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	ARPC2	O15144	300 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	CD5L	O43866	347 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	FARS2	O95363	451 aa	Known RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	H1F0	P07305	194 aa	Known RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	CCL2	P13500	99 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	HSD17B1	P14061	328 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	MSX2	P35548	267 aa	Predicted RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	LIMS1	P48059	325 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	SLC9A3	P48764	834 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	LCN6	P62502	163 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	ERVK-25	P63136	954 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	MRPS34	P82930	218 aa	Known RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	LOXL1	Q08397	574 aa	Predicted RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	SEC23B	Q15437	767 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	TAF11	Q15544	211 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	FGD3	Q5JSP0	725 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	TMEM53	Q6P2H8	277 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	TMPRSS11F	Q6ZWK6	438 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	OAF	Q86UD1	273 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	LRP11	Q86VZ4	500 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	CYP4Z1	Q86W10	505 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	RNF113B	Q8IZP6	322 aa	Known RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	LRRC18	Q8N456	261 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	SLC30A7	Q8NEW0	376 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	FAM46A	Q96IP4	442 aa	Known RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	SYT3	Q9BQG1	590 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	FUZ	Q9BT04	418 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	MAGEL2	Q9UJ55	1249 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	SAMD4A	Q9UPU9	718 aa	Known RBP	11.74	□□□□□ -0.53
POLE-215	ENST00000540987	ADAM18	Q9Y3Q7	739 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	CMAHP	Q9Y471	501 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987	JMJD1C	Q15652	2540 aa		11.74	□□□□□ -0.53
POLE-215	ENST00000540987		A0A1W2PRQ8	180 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	MGRN1	O60291	552 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	ENTPD5	O75356	428 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	RHCE	P18577	417 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	GLRX	P35754	106 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	YLPM1	P49750	1951 aa	Known RBP	11.73	□□□□□ -0.53
POLE-215	ENST00000540987	PDLIM4	P50479	330 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	FXYD6P3	P58550	94 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	ERVS71-1	P61550	626 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms