RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CCDC58Q4VC31 144 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 C3orf33Q6P1S2 294 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 CBLN3Q6UW01 205 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 APOOLQ6UXV4 268 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 SLC16A12Q6ZSM3 486 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 H1FNTQ75WM6 255 aaPredicted RBP7.48□□□□□ -1.21
CHD4-208ENST00000540960 PLCZ1Q86YW0 608 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 RPRMLQ8N4K4 120 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 OR11G2Q8NGC1 345 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 THAP3Q8WTV1 239 aaPredicted RBP7.48□□□□□ -1.21
CHD4-208ENST00000540960 ASB17Q8WXJ9 295 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 SGCDQ92629 289 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 KCTD7Q96MP8 289 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 FRMD6Q96NE9 622 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 DACH2Q96NX9 599 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 DCUN1D5Q9BTE7 237 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 MED18Q9BUE0 208 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 KATNB1Q9BVA0 655 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 ANGPTL4Q9BY76 406 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 DCSTAMPQ9H295 470 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 OR51V1Q9H2C8 321 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 BEX4Q9NWD9 120 aaPredicted RBP7.48□□□□□ -1.21
CHD4-208ENST00000540960 HPF1Q9NWY4 346 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 ERVK13-1Q9NX77 482 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 CRIM1Q9NZV1 1036 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 AASSQ9UDR5 926 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 TRAPPC4Q9Y296 219 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 GPR52Q9Y2T5 361 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 LSM2Q9Y333 95 aaKnown RBP7.48□□□□□ -1.21
CHD4-208ENST00000540960 HDGFL3Q9Y3E1 203 aa7.48□□□□□ -1.21
CHD4-208ENST00000540960 RYR3Q15413 4870 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 LOC102725191A0A1B0GVB3 256 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 CLDN25C9JDP6 229 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 NPIPA5E9PKD4 350 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ZNF670-ZNF695F2Z2N8 137 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 M0R082 166 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 M0R129 80 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ARHGEF9O43307 516 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 RNF13O43567 381 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 GPRIN2O60269 458 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 EIF1BO60739 113 aaKnown RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 TMCC2O75069 709 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ADAM11O75078 769 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 NPIPB7O75200 414 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 CBR3O75828 277 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ZNF432O94892 652 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 VAMP5O95183 116 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 IL1AP01583 271 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 IGHMP01871 453 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ABOP16442 354 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ZNF17P17021 662 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 FGF9P31371 208 aaPredicted RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 TGFBR2P37173 567 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 LIPAP38571 399 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 CASP3P42574 277 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 RORCP51449 518 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 GAS1P54826 345 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 DSCR4P56555 118 aaPredicted RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 RPL27P61353 136 aaKnown RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 SLC35A1P78382 337 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD4-208ENST00000540960 SELENBP1Q13228 472 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 CRMP1Q14194 572 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 NDUFAF6Q330K2 333 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ZNF404Q494X3 552 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 SLC35F1Q5T1Q4 408 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 H3F3CQ6NXT2 135 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ZNF322Q6U7Q0 402 aaPredicted RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 ARSKQ6UWY0 536 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 FAM220AQ7Z4H9 259 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ADGRG3Q86Y34 549 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ARIH2OSQ8N7S6 290 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ZNF454Q8N9F8 522 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 OR10H4Q8NGA5 316 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 OR51G2Q8NGK0 314 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 PAQR8Q8TEZ7 354 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 PSMF1Q92530 271 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 TMEM41AQ96HV5 264 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD4-208ENST00000540960 TXNIPQ9H3M7 391 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 ALKBH4Q9NXW9 302 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 B4GALT7Q9UBV7 327 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 NPIPA1Q9UND3 350 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 MRPS18CQ9Y3D5 142 aaKnown RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 FKBP7Q9Y680 259 aa7.47□□□□□ -1.21
CHD4-208ENST00000540960 PHF3Q92576 2039 aaKnown RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
CHD4-208ENST00000540960 A0A075B6Q4 140 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 LOC100506127A0A0U1RQW1 187 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 TRDV1A0A1B0GX56 115 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 C12orf71A8MTZ7 269 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 MCIDASD6RGH6 385 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 J3QRE1 110 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 GNB5O14775 395 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 FZD7O75084 574 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 SULT1C4O75897 302 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 NTN1O95631 604 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 BGLAPP02818 100 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 LIMS3P0CW19 117 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms