RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 AQP12BA6NM10 295 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 H7C1C5 153 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 XKRYO14609 159 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 GSC2O15499 205 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 ATP5HO75947 161 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 CCNB2O95067 398 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 UBL3O95164 117 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FARS2O95363 451 aaKnown RBP8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RAB36O95755 333 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 DANCRP0C864 163 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RAP2AP10114 183 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FPR3P25089 353 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 SDHAP31040 664 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 GIPRP48546 466 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RASSF2P50749 326 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FABP6P51161 128 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 HMGA2P52926 109 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FXYD6P3P58550 94 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 LCN6P62502 163 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RAB1AP62820 205 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 NKX6-1P78426 367 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-215ENST00000540904 C3orf36Q3SXR2 165 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 THEM4Q5T1C6 240 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 C10orf128Q5T292 105 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 OR2T5Q6IEZ7 315 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 PGBD2Q6P3X8 592 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 PGM2L1Q6PCE3 622 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 SMARCD3Q6STE5 483 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 SPNS3Q6ZMD2 512 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FAM122BQ7Z309 247 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 SPATA24Q86W54 205 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 LURAP1LQ8IV03 231 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 AQP12AQ8IXF9 295 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 ADGRG5Q8IZF4 528 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FBXL14Q8N1E6 418 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 LRRC18Q8N456 261 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 OR9Q2Q8NGE9 314 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 OR4C15Q8NGM1 316 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 OR2T29Q8NH02 315 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FGFBP3Q8TAT2 258 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FANK1Q8TC84 345 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 FNDC8Q8TC99 324 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 GNPDA2Q8TDQ7 276 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 CANT1Q8WVQ1 401 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 IGFBPL1Q8WX77 278 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 GTPBP3Q969Y2 492 aaKnown RBP8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RASD2Q96D21 266 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 NMD3Q96D46 503 aaKnown RBP8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RBP7Q96R05 134 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 DHRS9Q9BPW9 319 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 ALG12Q9BV10 488 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 CHID1Q9BWS9 393 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 CADM1Q9BY67 442 aaKnown RBP8.02□□□□□ -1.13
SNHG1-215ENST00000540904 REEP1Q9H902 201 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 RNF121Q9H920 327 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 SMURF2Q9HAU4 748 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 NRIP3Q9NQ35 241 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 VNN3Q9NY84 501 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 POMPQ9Y244 141 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 SAMHD1Q9Y3Z3 626 aaKnown RBP8.02□□□□□ -1.13
SNHG1-215ENST00000540904 IER3IP1Q9Y5U9 82 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 OTOGQ6ZRI0 2925 aa8.02□□□□□ -1.13
SNHG1-215ENST00000540904 ANKRD17O75179 2603 aaKnown RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ALPK2Q86TB3 2170 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 IGHV2OR16-5A0A0B4J2B6 119 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SLC22A23A1A5C7 686 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 PRSS37A4D1T9 235 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SOCS2O14508 198 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 PPP1R3DO95685 299 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 CD8AP01732 235 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF14P17017 642 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 CALCRP30988 508 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 TTKP33981 857 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 CDKN1AP38936 164 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 GUCA1AP43080 201 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 GSSP48637 474 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 PTH2RP49190 550 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 RPS6KA3P51812 740 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF133P52736 654 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ADAM8P78325 824 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 KRR1Q13601 381 aaKnown RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 RAB39AQ14964 217 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SGCAQ16586 387 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 NRN1LQ496H8 165 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 MESTQ5EB52 335 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 AGAP6Q5VW22 663 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 GPR139Q6DWJ6 353 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF544Q6NX49 715 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 C1orf94Q6P1W5 598 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SLC25A47Q6Q0C1 308 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 VHLLQ6RSH7 139 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 DPY19L2P2Q6ZN68 376 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SLC16A14Q7RTX9 510 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 DTX2Q86UW9 622 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 MUC15Q8N387 334 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 AQP11Q8NBQ7 271 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF75AQ96N20 296 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ERMAPQ96PL5 475 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 GPX7Q96SL4 187 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 TRAF4Q9BUZ4 470 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms