RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
SNHG1-213ENST00000540725 INTS9Q9NV88 658 aaKnown RBP12.08□□□□□ -0.48
SNHG1-213ENST00000540725 TRIM33Q9UPN9 1127 aa12.08□□□□□ -0.48
SNHG1-213ENST00000540725 A0A1W2PRG6 482 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 MCIDASD6RGH6 385 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 SNAP29O95721 258 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 PTHP01270 115 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 F13BP05160 661 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 LCKP06239 509 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 VIMP08670 466 aaKnown RBP12.07□□□□□ -0.48
SNHG1-213ENST00000540725 GZMMP51124 257 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF84P51523 738 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 LMO4P61968 165 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 CCL8P80075 99 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 RPL18Q07020 188 aaKnown RBP12.07□□□□□ -0.48
SNHG1-213ENST00000540725 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 TBC1D28Q2M2D7 210 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 VMACQ2NL98 169 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 NRN1LQ496H8 165 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 DEF8Q6ZN54 512 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 CCDC80Q76M96 950 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 MEX3DQ86XN8 651 aaKnown RBP12.07□□□□□ -0.48
SNHG1-213ENST00000540725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
SNHG1-213ENST00000540725 SYT14Q8NB59 555 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 RBM15BQ8NDT2 890 aaKnown RBP12.07□□□□□ -0.48
SNHG1-213ENST00000540725 OR1J2Q8NGS2 313 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF519Q8TB69 540 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 RASSF5Q8WWW0 418 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 C11orf40Q8WZ69 217 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 LRRC37BQ96QE4 947 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 MRPL13Q9BYD1 178 aaKnown RBP12.07□□□□□ -0.48
SNHG1-213ENST00000540725 GRIP1Q9Y3R0 1128 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 TANC2Q9HCD6 1990 aa12.07□□□□□ -0.48
SNHG1-213ENST00000540725 IQCMA0A1B0GVH7 501 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 CDC14BO60729 498 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 VENTXO95231 258 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 MT-ND1P03886 318 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 RAD52P43351 418 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 UGT2B15P54855 530 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 UCP2P55851 309 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 PLP2Q04941 152 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 PCGF3Q3KNV8 242 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 SHQ1Q6PI26 577 aaKnown RBP12.06□□□□□ -0.48
SNHG1-213ENST00000540725 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 NKAIN4Q8IVV8 208 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 LRRC18Q8N456 261 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 ICA1LQ8NDH6 482 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 PFN4Q8NHR9 129 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 ASB10Q8WXI3 467 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 SEPHS2Q99611 448 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 BCL2L14Q9BZR8 327 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 LRMDAQ9H2I8 198 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 NANOGQ9H9S0 305 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 NPHS2Q9NP85 383 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 INIPQ9NRY2 104 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 SLCO1C1Q9NYB5 712 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 NKIRAS2Q9NYR9 191 aa12.06□□□□□ -0.48
SNHG1-213ENST00000540725 A0A0A6YYJ9 748 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 TRAV20A0A0B4J274 112 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 OR7A10O76100 309 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MMP7P09237 267 aaPredicted RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 ACADSP16219 412 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 FUT1P19526 365 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 TNFRSF1BP20333 461 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 AQP2P41181 271 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 RBM34P42696 430 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 DAP3P51398 398 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 HSF2Q03933 536 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MMEL1Q495T6 779 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 SEMA6DQ8NFY4 1073 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 TMEM255BQ8WV15 326 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 SGTBQ96EQ0 304 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MAGEB18Q96M61 343 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 SH3GLB1Q9Y371 365 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MGAM2Q2M2H8 2515 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 IGHV1-69-2A0A0G2JMI3 117 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 A0A0G2JND7 137 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 FBP2O00757 339 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MGRN1O60291 552 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 EDF1O60869 148 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 OR5F1O95221 314 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 SLC2A10O95528 541 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 APLNRP35414 380 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 CRYBB2P43320 205 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF133P52736 654 aaPredicted RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 TAS2R41P59536 307 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MRPS34P82930 218 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MVKQ03426 396 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 GLO1Q04760 184 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 SCGB2A2Q13296 93 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 RABL3Q5HYI8 236 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 PABPC1L2AQ5JQF8 200 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 AVPI1Q5T686 147 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 NANOGP8Q6NSW7 305 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 FAHD2BQ6P2I3 314 aaPredicted RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 THSD4Q6ZMP0 1018 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms