RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TAMM41Q96BW9 452 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 SGTBQ96EQ0 304 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF75AQ96N20 296 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 SH3GL3Q99963 347 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 INIPQ9NRY2 104 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 DECR2Q9NUI1 292 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF224Q9NZL3 707 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 TAAR3PQ9P1P4 343 aa13.14□□□□□ -0.31
UBE3B-211ENST00000539843 EIF3KQ9UBQ5 218 aaKnown RBP13.14□□□□□ -0.31
UBE3B-211ENST00000539843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBE3B-211ENST00000539843 BBIP1A8MTZ0 92 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 OR7A10O76100 309 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 OR5F1O95221 314 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 NPPAP01160 153 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 HPXP02790 462 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 PATE4P0C8F1 98 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 NAT2P11245 290 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 FUT1P19526 365 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 IL2RGP31785 369 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 SEC24CP53992 1094 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 RPL18Q07020 188 aaKnown RBP13.13□□□□□ -0.31
UBE3B-211ENST00000539843 ELFN2Q5R3F8 820 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 RBM45Q8IUH3 476 aaKnown RBP13.13□□□□□ -0.31
UBE3B-211ENST00000539843 LRRC17Q8N6Y2 441 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 MCHR2Q969V1 340 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 C1orf159Q96HA4 380 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 SOX7Q9BT81 388 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF426Q9BUY5 554 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 NARFLQ9H6Q4 476 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 HINT3Q9NQE9 182 aaKnown RBP13.13□□□□□ -0.31
UBE3B-211ENST00000539843 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
UBE3B-211ENST00000539843 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 C17orf100A8MU93 164 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 EDF1O60869 148 aaKnown RBP13.12□□□□□ -0.31
UBE3B-211ENST00000539843 IGF2P01344 180 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 F13BP05160 661 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 MSMBP08118 114 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 THRBP10828 461 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 ACADSP16219 412 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 CCNOP22674 350 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 GCH1P30793 250 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 CD47Q08722 323 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 TAF11Q15544 211 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 ALKBH6Q3KRA9 238 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 NANOGP8Q6NSW7 305 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 LRFN4Q6PJG9 635 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 LRP11Q86VZ4 500 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 C1orf174Q8IYL3 243 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 LRRC18Q8N456 261 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 SYT14Q8NB59 555 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 PCYOX1LQ8NBM8 494 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 CPEB3Q8NE35 698 aaKnown RBP13.12□□□□□ -0.31
UBE3B-211ENST00000539843 OR4D11Q8NGI4 311 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 CLDND2Q8NHS1 167 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 FNDC8Q8TC99 324 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 TMEM186Q96B77 213 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 RAB39BQ96DA2 213 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 TIMD4Q96H15 378 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF347Q96SE7 839 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 OR51B6Q9H340 312 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 SIAEQ9HAT2 523 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF275Q9NSD4 429 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-211ENST00000539843 HIF1ANQ9NWT6 349 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 GID8Q9NWU2 228 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
UBE3B-211ENST00000539843 YLPM1P49750 1951 aaKnown RBP13.12□□□□□ -0.31
UBE3B-211ENST00000539843 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 PLSCR5A0PG75 271 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 THY1P04216 161 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-211ENST00000539843 COL8A2P25067 703 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 UCP2P55851 309 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 MSMPQ1L6U9 139 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 LRRC23Q53EV4 343 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-211ENST00000539843 ALDH16A1Q8IZ83 802 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 ASB10Q8WXI3 467 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 LRRC58Q96CX6 371 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 RBP7Q96R05 134 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 TMEM120AQ9BXJ8 343 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 NDEL1Q9GZM8 345 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 MYEF2Q9P2K5 600 aaKnown RBP13.11□□□□□ -0.31
UBE3B-211ENST00000539843 RIMS3Q9UJD0 308 aa13.11□□□□□ -0.31
UBE3B-211ENST00000539843 IGLV3-9A0A075B6K5 115 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 NPIPB13A6NJU9 1138 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 NPIPB4C9JG80 1138 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms