RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 IL32P24001 234 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 GRK5P34947 590 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 CSNK1A1P48729 337 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 TFAP2EQ6VUC0 442 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 ABHD12BQ7Z5M8 362 aaPredicted RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 ADCK1Q86TW2 530 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 TMEM123Q8N131 208 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 OR4Q3Q8NH05 313 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 LILRB1Q8NHL6 650 aaPredicted RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 CA5BP1Q8WTZ4 195 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 RASD2Q96D21 266 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 RBP7Q96R05 134 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ALG12Q9BV10 488 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 KLHL21Q9UJP4 597 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 SULT1C4O75897 302 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 HIST1H1CP16403 213 aaKnown RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 AGAP20933 346 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 RUNX1T1Q06455 604 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 CD47Q08722 323 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ITGADQ13349 1161 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 SLC25A35Q3KQZ1 300 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 MESTQ5EB52 335 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 TSPO2Q5TGU0 170 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 TMEM236Q5W0B7 351 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ACSM5Q6NUN0 579 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 XKRXQ6PP77 449 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 BEND4Q6ZU67 534 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 MRGPRGQ86SM5 289 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 C20orf196Q8IYI0 205 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 SYT14Q8NB59 555 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ZNF555Q8NEP9 628 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 NOXO1Q8NFA2 376 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 OR4K13Q8NH42 304 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 HDAC2Q92769 488 aaKnown RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 SLC38A2Q96QD8 506 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 MRPL13Q9BYD1 178 aaKnown RBP13.64□□□□□ -0.23
DDB1-216ENST00000539739 LINC00470Q9BZP3 86 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 DIABLOQ9NR28 239 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 ATPIF1Q9UII2 106 aa13.64□□□□□ -0.23
DDB1-216ENST00000539739 RIIAD1A6NNX1 92 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 RENP00797 406 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 IGHV3-9P01782 118 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 EPHA2P29317 976 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 TTKP33981 857 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 POLR2IP36954 125 aaKnown RBP13.63□□□□□ -0.23
DDB1-216ENST00000539739 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDB1-216ENST00000539739 KCNJ8Q15842 424 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 LIX1LQ8IVB5 337 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 ZNF808Q8N4W9 903 aaPredicted RBP13.63□□□□□ -0.23
DDB1-216ENST00000539739 ZNF610Q8N9Z0 462 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 TRUB1Q8WWH5 349 aaKnown RBP13.63□□□□□ -0.23
DDB1-216ENST00000539739 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 UQCC2Q9BRT2 126 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 ULBP2Q9BZM5 246 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 GRIP2Q9C0E4 1043 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 OPN3Q9H1Y3 402 aaPredicted RBP13.63□□□□□ -0.23
DDB1-216ENST00000539739 CMC2Q9NRP2 79 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 SLC7A10Q9NS82 523 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 ASB6Q9NWX5 421 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 TVP23BQ9NYZ1 205 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
DDB1-216ENST00000539739 FOXD3Q9UJU5 478 aaPredicted RBP13.63□□□□□ -0.23
DDB1-216ENST00000539739 PRSS37A4D1T9 235 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 ZNF587BE7ETH6 402 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 H0YJX3 145 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 M0R3G1 203 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 ZG16O60844 167 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 UPK3AO75631 287 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 AGFG2O95081 481 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 ZNF3P17036 446 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 EDNRAP25101 427 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 CDKN2AP42771 156 aaKnown RBP13.62□□□□□ -0.23
DDB1-216ENST00000539739 ALDH3B2P48448 385 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 SNAPC1Q16533 368 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 MOGQ16653 247 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 THEM4Q5T1C6 240 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 LEG1Q6P5S2 330 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 Q6ZT83 130 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 LUZP2Q86TE4 346 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 DHRSXQ8N5I4 330 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 TMEM54Q969K7 222 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 LRRC46Q96FV0 321 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 SNX18Q96RF0 628 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 MBOAT4Q96T53 435 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 RELNP78509 3460 aa13.62□□□□□ -0.23
DDB1-216ENST00000539739 A8MXE2 369 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 H7C1C5 153 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 SURF4O15260 269 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms